Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01038 ATGGTCTTGATTGATGAGGAGGGTACGACCATCCAAGCAAGTGTGCTAAATAATAGGAACCTCCTTCATAAATTTCGCTTCTCCATTGTTGAAGGCCAAATTTACAAATTTGCAAACTTTGAGGTCACTCCAAATGTGAATCAGTATAGAGCATGTAGCCACCAATTCAAGATAACATTCACTCCTCGGACATCTTGTGCAGATACAATCGCTACAATTCCAACTTATGCCTACTCATTTTTCCCTATCCTAGAAATCATGAAAATTGATTTCCGTCATCCTGTGGATAAGCTTATTGATGTGGTGGCTTTTGTGAAGGATGTAGGCACATTGGATGAGTTCTGCAAAGGGAATGAGACGAAAAAAAGGCTACGTCTGAAACTGGCTGACTCTGAGAACAATGAAGTGGAGTGCACATTATTTGATAACTGTGCTTCGGATGCTTATATGGCATACTTGCAAAATACTGAAAGTCCTGTTGTAGTTTTATTAAACTTAGCAAGAGTTGGATTTTCTGAGGATGGTACACCACAAGTTTGTAGCTCCTTCAATGCTACTATGGCTTTATTTAACCCTTCTATCACAGAGGTTAAAAATTTGATACAAAGTGCAAAGGATGAAAAGTCCCCTGTCATGGTTGCACTCTCTCAACCCAAGACTTCACAGCCAAGTCAGCATTCGAATGGGGCTTCTTTACACAACCAGACCAAAGTCACTATCTCTCAAATACCTGAACAAGCAATTGGAGATTCATTTGTAATCCACTGTCAAATTTATAAACTTGAAACAAAACACGGTTGGATTTATGATGCATGCTCAAAGTGTGGGTCAAAGGTCAAAATAGATGATCCTTCATGGATTTGTCCCCTCTGCAAGAAAAAACCAGACTCAATTGAACCAAAGATGAAAATTCATTATCTTGTCAGAGACCAGACTGGATCAGCTTCTGTGATTTTCTGGGATAAACTTGATGTTCCGTTGGTAAAGAAGACAGCATCTGAACTAATTAGTTCACTAAATGAGAAAAAAGAAAAGGATGACGATGACGATGACATTCCTAAAGAGTTAGACCTTCCGGTTGGAAAGAATCTTCTGCTCAAACTGAAGATGAATGAGTTCAACAAGAAGTATCCTACTTCTAGCATCAGTGTTGGCCAATACACCATATGCGAAGATCTTTCGAACCAGTTCAGTGAGGCAATTACAGAGAGTTCATTTGAAGGGTGTTCTGAAGTGAAGGCAACTGCAGAGAGTGTTGATGCTGAAAGTGTTACTCCACTTGTAACACCTCTTGATCATAGCACCATATCTGACCTTTCTCAACATGTCACCCCTGCTCCTATTAAGGGGAAAAGAAGGATAACCAACAAGAGAAATGTTGTTAAGGATGACATACCAACTACTTCTCTTCAGTCTTTTGCTGGTCCTGCTGAGGAAATAGTGACAAAAGTGATAAAGCAAGAGAAGTAG 1470 0.3966 MVLIDEEGTTIQASVLNNRNLLHKFRFSIVEGQIYKFANFEVTPNVNQYRACSHQFKITFTPRTSCADTIATIPTYAYSFFPILEIMKIDFRHPVDKLIDVVAFVKDVGTLDEFCKGNETKKRLRLKLADSENNEVECTLFDNCASDAYMAYLQNTESPVVVLLNLARVGFSEDGTPQVCSSFNATMALFNPSITEVKNLIQSAKDEKSPVMVALSQPKTSQPSQHSNGASLHNQTKVTISQIPEQAIGDSFVIHCQIYKLETKHGWIYDACSKCGSKVKIDDPSWICPLCKKKPDSIEPKMKIHYLVRDQTGSASVIFWDKLDVPLVKKTASELISSLNEKKEKDDDDDDIPKELDLPVGKNLLLKLKMNEFNKKYPTSSISVGQYTICEDLSNQFSEAITESSFEGCSEVKATAESVDAESVTPLVTPLDHSTISDLSQHVTPAPIKGKRRITNKRNVVKDDIPTTSLQSFAGPAEEIVTKVIKQEK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01038 489 Gene3D - 220 394 IPR012340 -
Accr10g01038 489 Gene3D - 1 67 IPR012340 -
Accr10g01038 489 SUPERFAMILY Nucleic acid-binding proteins 1 65 IPR012340 -
Accr10g01038 489 SUPERFAMILY Nucleic acid-binding proteins 78 205 IPR012340 -
Accr10g01038 489 PANTHER OS03G0429900 PROTEIN 1 431 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Accr10g01038 489 SUPERFAMILY Nucleic acid-binding proteins 237 374 IPR012340 -
Accr10g01038 489 CDD RPA1_DBD_A_like 1 64 - -
Accr10g01038 489 CDD RPA1_DBD_B_like 100 203 - -
Accr10g01038 489 Pfam Domain of unknown function DUF223 1 69 IPR003871 -
Accr10g01038 489 Pfam Replication factor-A C terminal domain 252 374 IPR013955 -
Accr10g01038 489 Gene3D - 72 213 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01038 Accr-Chr10 31721712 31727668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01038 3 313 Core DNA Replication Machinery Family AT2G06510 22.823 3.99e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01038 - - pcin:129290097 385.956