LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g01036	ATGAATACTTCCTCTTTTTCTCTTTTCATCTTTCTGTTTCTCCATCTTTTACTCTTGCCTCTCCACAATATTGCTTTTGCCAATAATGCCACCAGTTACCTCCGCTTGGAAAACATTGCCCTCAACTGTGGCACTAACTCGTCAAAACAAGGGTCATATGATGAGAGGATCTGGACTAGTGATGCAGGTTCAGCGTATGTGTCCTCAAAAGATGCAGAAACTAACAAGTCCCTGATGGCCAAAGCCTCTATGATTAATGCATCTGTTCCTGATGTTCCATATATGACTGCTCGAGTATTTCACTCTCCATTTGCCTACAGATTCAATGTGACTCCAGGTTCCAAATTTGTCCGCCTCCACTTCTACCCAACTTCTTACTCGGGCCTAGATGTCTCCAAAGCTTTTGTATCAGTCACTGCTGGTAATTTCACTCTCATGCATAACTTGAGTGTTTCGCTCACTGCTGATTACCTCAACAAAGCATATCTGATGAAAGAGTTTATCATCCATGTGAGTGGAAGAACCTTGGAACTGACTTTCTCTCCATCATCCAATGCCTCGGATGTCTATGCATTCGTCAATGGAATCGAAGTTGTTTCTATGCCTTCCAATCTCTATATTCAGGGTGATAAAGCCCATATTCCTTTAGTTGGTCATGATCCTGTACTATACTATATTTATAATGATTCTGCCTTGGAAACCATGTATAGAATCGACGTAGGAGGGGATGATATTCCAGCTAAAGATGATACGGCGGGGATGTTTCGCACTTGGACCGGAGATGATGATTACTTCTTTTTACCTCCTGCAGCCTTAGAACCCAGCGATATGGTCTCGCCAATTCTATATCCTGAAACTGCTCCAGCATATCTTGCGCCAGAACTTGTCTATCGCACAGCCCGAGCAATGGCACCCTTTCAAGATGAACGGATTAATTTAAACTATAATCTGTCATGGTTCTTCCCGATTGATTCTGGTTTCAATTATCTCATCAGGCTGCACTTTTGTAATATCTTCCAAGACATAACTATGGTGAATAAGATCGTTTTTACTATATATTTAAATAATCAAACAGCTAATGATGAAGTTGATGTGATTGCTATGAGTGGTGGTCCTCGAATTCCTATGTACCTAGACTTTGTAGTGATGGTTCCTGAAACTAGTGAGGGGAAGCAGGATCTTTGGGTAGATCTTCATCCAGATGTCCGGACTAAACCTCAGCAGTATAATGCTTTTTTGAATGGTGTGGAGATCTTCAAACTTAGCAATTGGGACGGAAATCTTGCAGGGGTCAACCCAATCAGCGGCAAGTTCGAGTCAGTTGTGCCAGTGCCACATGTTGCAATATCAAAAAAGCCAAAGAAAATCAAATTTATCATCATTGGATGTGGACTAAGTCTTGTGGCACTAGGAGGATCAGTTCTCTTTTTCGTGATTGTTTACGTGCTGAAATTAGTTGAGCCAAGGAAGATTTCATGCCGTCACCTCCTTATCCTTATTCGTAATAAAGTTAGAAAAGCTCACAAGTCATCTTTTCCCCATGATAATTTCTCCATGGATGAGATAAGAGTGGCAACAAATAACTTTGACGAGGCTCTGGTCATTGGCATAGGTGGGTTTGGCAAGGTTTACAAGGCCAGTTTTGATGGTGGGTCTACCTTAGTAGCAATAAAGCGGAGCAGTCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGACAGAGATCCATGTGCTCTCCAAACTGCGCCACCAAAACCTTGTTTCTATTTTGGGTCATTGCCAAGAAGATGGAGAAATGATTCTGGCTTATGAATACATGTCCAATGGTACTCTGTTTGACCATCTACATTTGAGATCAAGGGAAGAACTCCCTTTATCATGGATTCAACGTCTTGAGATATGCATTGGAGTCGCAAGGGGCTTACACTACCTCCACACCGGCACAGAGCACAAGTTCATCCACCGAGACATCAAGACCAGCAATATACTCTTAGACCATAATTGGGTGGCCAAAGTTTCAGACTTTGGCTTGTCAAAGGCAAGCAACCCAGACCTAGCCAGCACCAATGTCAAGGGCAGTGTTGGATACTTAGATCCAGAGTACTTTCGGCGACACAAGTTGACTGAGAAATCTGATGTGTACTCGTTTGGGGTGGTGCTATTGGAGGTGCTGAGTGCAAGGCCTGCTGTGAATCCGTTTGAAGATGATGAGCATGGTAACTTGGCGGAATGGGCTCTGTACTGCTGTGAGAATGGCATAACAACTCAATTGGTGGACCCTGACCTTGAAGGAAAGATAGCAACAGAATCTTTTGAGACATATATTGAGGTGGCAAAGAAATGCTTGGCTGAGAAAGGGATAGAGCGTCCCACCATGAGTGATGTGTTGCAGAGACTTGCCCTGGCATTGCAGCTTCAGAGAAATGCTGATAATAACATAGCACCAACCAGAGATGGCAAGAGAACAGAAAATACCGATTTAGAGAGAAACTCCGATTTGACACCTGGGATTGAGTTCTCTGAGATCATGATACCCATTGGACGATGA	2547	0.4299	MNTSSFSLFIFLFLHLLLLPLHNIAFANNATSYLRLENIALNCGTNSSKQGSYDERIWTSDAGSAYVSSKDAETNKSLMAKASMINASVPDVPYMTARVFHSPFAYRFNVTPGSKFVRLHFYPTSYSGLDVSKAFVSVTAGNFTLMHNLSVSLTADYLNKAYLMKEFIIHVSGRTLELTFSPSSNASDVYAFVNGIEVVSMPSNLYIQGDKAHIPLVGHDPVLYYIYNDSALETMYRIDVGGDDIPAKDDTAGMFRTWTGDDDYFFLPPAALEPSDMVSPILYPETAPAYLAPELVYRTARAMAPFQDERINLNYNLSWFFPIDSGFNYLIRLHFCNIFQDITMVNKIVFTIYLNNQTANDEVDVIAMSGGPRIPMYLDFVVMVPETSEGKQDLWVDLHPDVRTKPQQYNAFLNGVEIFKLSNWDGNLAGVNPISGKFESVVPVPHVAISKKPKKIKFIIIGCGLSLVALGGSVLFFVIVYVLKLVEPRKISCRHLLILIRNKVRKAHKSSFPHDNFSMDEIRVATNNFDEALVIGIGGFGKVYKASFDGGSTLVAIKRSSPMSEQGALEFETEIHVLSKLRHQNLVSILGHCQEDGEMILAYEYMSNGTLFDHLHLRSREELPLSWIQRLEICIGVARGLHYLHTGTEHKFIHRDIKTSNILLDHNWVAKVSDFGLSKASNPDLASTNVKGSVGYLDPEYFRRHKLTEKSDVYSFGVVLLEVLSARPAVNPFEDDEHGNLAEWALYCCENGITTQLVDPDLEGKIATESFETYIEVAKKCLAEKGIERPTMSDVLQRLALALQLQRNADNNIAPTRDGKRTENTDLERNSDLTPGIEFSEIMIPIGR	848

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g01036	848	Pfam	Protein kinase domain	534	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g01036	848	FunFam	FERONIA receptor-like kinase	230	422	-	-
	Accr10g01036	848	MobiDBLite	consensus disorder prediction	812	831	-	-
	Accr10g01036	848	FunFam	FERONIA receptor-like kinase	38	202	-	-
	Accr10g01036	848	Pfam	Malectin-like domain	41	420	IPR024788	-
	Accr10g01036	848	MobiDBLite	consensus disorder prediction	814	828	-	-
	Accr10g01036	848	PANTHER	OS03G0124300 PROTEIN-RELATED	9	477	IPR046957	GO:0004672
	Accr10g01036	848	SMART	serkin_6	529	801	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g01036	848	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	652	664	IPR008271	GO:0004672\|GO:0006468
	Accr10g01036	848	Gene3D	Phosphorylase Kinase; domain 1	495	605	-	-
	Accr10g01036	848	Gene3D	Transferase(Phosphotransferase) domain 1	606	823	-	-
	Accr10g01036	848	Gene3D	-	230	422	-	-
	Accr10g01036	848	Gene3D	-	38	202	-	-
	Accr10g01036	848	FunFam	Receptor-like protein kinase FERONIA	606	821	-	-
	Accr10g01036	848	ProSitePatterns	Protein kinases ATP-binding region signature.	535	558	IPR017441	GO:0005524
	Accr10g01036	848	ProSiteProfiles	Protein kinase domain profile.	529	801	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g01036	848	CDD	STKc_IRAK	535	795	-	-
	Accr10g01036	848	SUPERFAMILY	Protein kinase-like (PK-like)	512	797	IPR011009	-
	Accr10g01036	848	FunFam	receptor-like protein kinase FERONIA	498	605	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g01036	Accr-Chr10	31620673	31623219	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g01036	29	848	Receptor kinase-like Gene Family	AT3G51550	47.112	0.0	738

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Accr10g01036		Malectin_like	1.7e-37	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g01036	-		-	gmx:100776859	960.288