Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01030 ATGGATGAGATAAGAGTGGCAACAAATAACTTTGATGAGGCTCTGGTCATTGGCATCGGTGGTTTTGGTAAAGTTTACAAGGCTAGTTTTGATTATGGGTCTACCTTTGTGACCATAAAGCGGAGCAGTCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGACAGAGATACATGTGCTCTCCCAACTGCACCACCAAAACCTTGTTTCTCTTTTGGGTCATTGCCAAGAAGATGAAGAGATGATTCTGGTTTATGAATATATGTCCAGTCATACTCTGTTTGACCATCTTCATTTGAGATCGAGGGGAGATCTCCCTTTGTCATGGACCCAACGTCTTGAGAGGTGCATTCGAGTTGCAAGGGGTTTACACTACCTCCACACCGGCACAGAGCACAAGTTCATCGACCGGGACATCAAGACAAGCAATATACTCTTAGACCATAATTGGGTGGCCAAACTTTCAGCCTTTGGCTTGTCAAAGGCAACCAACCCAGCTCTAGTCAGCACCACTGTCAAGGGCAATGTTGGATACTTCCCAGAGTACTTTTGGCGTCACAAGTTGACTGAGAAATCTGATGTGTACTCATTTGGGGTGGTGCTATTTGAGGTGCTGAGCGCAAGGCTTGCTGTGAATCCAGTTGAAGATGATAAGCATGGTAGCTTGGTGGACTGGGCTCTGTATTGCTGTGAGAACGGCATTGCAACTCAACTTGTAGACCCTGACCTTGAAGGAAAGATAGCTACAGAATCGTTTGAGAAATATATTGAGGTGGCAAAGAAATGCTTGGCTGAGAAAGGGGTGGAGCGCCCCACCATGAGTGATGTGTTGCAGAGACTTGTCCATTGCAGCTTCAGAAAAAATGCTGATATAGCACCAACCAGAGATGGCAATAGAACAGAAAAGGCCGATTTAGAGAGAAACTCAGATTTGACACCTGGAATTGAGTTCTCTGAGATCATAATAACCATTGGGCGATGA 981 0.4506 MDEIRVATNNFDEALVIGIGGFGKVYKASFDYGSTFVTIKRSSPMSEQGALEFETEIHVLSQLHHQNLVSLLGHCQEDEEMILVYEYMSSHTLFDHLHLRSRGDLPLSWTQRLERCIRVARGLHYLHTGTEHKFIDRDIKTSNILLDHNWVAKLSAFGLSKATNPALVSTTVKGNVGYFPEYFWRHKLTEKSDVYSFGVVLFEVLSARLAVNPVEDDKHGSLVDWALYCCENGIATQLVDPDLEGKIATESFEKYIEVAKKCLAEKGVERPTMSDVLQRLVHCSFRKNADIAPTRDGNRTEKADLERNSDLTPGIEFSEIIITIGR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01030 326 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Accr10g01030 326 SMART serkin_6 11 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01030 326 Gene3D Transferase(Phosphotransferase) domain 1 88 304 - -
Accr10g01030 326 PIRSF ILK 2 289 - -
Accr10g01030 326 SUPERFAMILY Protein kinase-like (PK-like) 2 286 IPR011009 -
Accr10g01030 326 Pfam Protein tyrosine and serine/threonine kinase 16 280 IPR001245 GO:0004672|GO:0006468
Accr10g01030 326 FunFam receptor-like protein kinase FERONIA 1 87 - -
Accr10g01030 326 ProSiteProfiles Protein kinase domain profile. 11 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01030 326 PANTHER OS07G0166700 PROTEIN 2 281 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01030 Accr-Chr10 31494725 31495705 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01030 3 280 Receptor kinase-like Gene Family AT3G51550 58.657 3.97e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Accr10g01030 PK_Tyr_Ser-Thr 3.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01030 - - gmx:100776859 397.897