Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g01023 ATGCCCAGCTCGAGGCAATCCTTCTGCATCTCTTCCTCCTCTTCCTCTCCTTTGTTTTGCATCGTTCTCTTTCATTCCATTTTTCTCTATGGTTTAGCATTCTCTGCAAATCATGAAGCATCTATTCTCTTCTCTTGGCTTCACAGCTCTGCTTCACCACCACATCCATCTTTCTCCAACTGGAACATCCTTGACGCCAACCCATGCAACTGGACCTTCTTAACATGTTCCCCACAAGGTTTTGTCACTGAAATCAATATACAATCCATCCCTCTACAGCTTAATTTTCCTTCCTATCTGTCTTCCTTTCTCCATCTTCAAAAGCTTGTCATTTCTGATGCCAATCTCACTGGAACCATCCCTGTCAACATTGGTGACTGCTCTGCCCTTACTCTCATTGACCTTAACTCCAACAATCTTGTTGGGTCTATCCCTTCAAGTATAGGTAAGCTTCAAAACTTAGAGAGCTTGTCTCTGAACACAAACCAATTTACTGGGAAAATCCCACTTGAGATAGGAAACTGCATTAGCCTTAAAAGTCTCATCCTTTTTGATAACCAGCTAAGTGGTTTTATCCCACCTGAGATAGGAAAGTTGTCAAAACTTGAGATTCTTAGAGCAGGAGGAAACAAAGACTTAGTTGGGAAAATCCCAGAAGAGATTGGAGAATGTAGGAATTTGACTGAGCTGGGCCTGGCTGATACTGGTTTATCAGGTTCATTGCCAGCTTCATTGGGAAAACTGAGCAAGCTTCAAACTCTGTCCATCTACACTACAGTGCTATCTGGTGAGATTCCAGCTGAGTTAGGTAATTGCTCTGAACTTGTTGATTTATTCCTGTATGAGAATAGTCTATTTGGGTCTATTCCACCTGAGCTGGGTAAGCTTCAAAAGCTGGAGCAATTGTTTTTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAGATTGGAAACTGTACAAGCTTGAAAAGAATTGATCTTTCTTTGAATTCTCTATCTGGCACTATCCCTTTATCTTTTGGCCGTCTGTTAGAACTTGAGGAGTTTATGATAAGTGATAATAATGTGTCTGGGTCAATACCTCCAAGCCTCTCAAATGCCTTATTTCTGCAGCAGCTTCAAGTTGACACAAATCAGCTCTCAGGTTTGATCCCCCCAGAGCTTGGGAGGTTATCAAAGCTCACAGTTTTCTTTGCTTGGCAAAACCAACTTGAAGGAAGTATTCCTTCTAGTCTGGCAAATTGTAGTAACCTACAAGCGCTAGATTTGTCTCACAATGAACTTACTGGTAGCATTCCTCCTGGCCTATTTCAACTTCAAAACCTTTCAAAATTGCTCTTGATTTCTAATGATATTTCTGGTTCAATCCCATTAGAAATAGGCCTTTGTAGTTCTCTTATAAGACTGAGACTTGGGAAGAATAGGATTACTGGTGTGATCCCCAAGTCAATAGGGAGCCTGAAAAATCTAAACTTTCTAGACCTCAATGAGAATCATCTTTCTGGGCAGGTCCCAGATGAGATTGGAAACTGCACAGAACTGCAAATGATAGATTTCAGCAGCAACAGTTTAGACGGTCCATTGCCTAATTCCTTGTCATCACTATCTTTGCTCCAAGTACTTGATGGCTCTTCAAACAGATTTTCAGGTCACATACCAGAAAGTTTCGGCCGTCTTGTTTCACTAAATAAACTAATCCTGGGCAGAAACTTGTTTTCCGGACCGATTCCTGCATCATTGAGCCAATGTTCAAGTCTCCAAATGCTTGATCTTAGTGGCAATGAGCTCTCGGGAAGCATTCCAGCAGAGCTGGGTCATATAGAGAATCTCGAAATCGCTCTTAACCTTAGTTTCAATTCTCTAAGTGGCCCAATTCCAGATCAAATCTCTGCTCTTACCAAGCTTTCTATACTGGACCTTTCTCATAACCTGTTAGAGGGAGGTTTAAACTCACTTGCAGGCCTAGATAATCTTGTCTCTCTCAATATTTCCTACAACAACTTCACAGGTTATCTACCAGATAATAAGCTTTTCAGGCAATTATCTCCAAAGGACCTAACTGGGAATCAAGGCCTTTGCTCATCTGGTCAAGACTCATGCTTTGTGAGTGCTTCAAGCATGACAATGAATGGAAGGGAGGCGAGGAAGTCGCGAAGGATTAAGCTAGCTCTTGGTTTGTTAGTAGTCTTAACAGTACTACTAACAATAATGGGGATAATTGCAGTGATAAAGGCAAGAAGAACCATTAGAGATGATGATTCAGAACTAGGGGACTCATGGCCATGGCAATTCATTCCATTCCAAAAGCTAAACTTTTCAGTGGATCAAGTGTTGAGACGTTTAGTTGAAGGGAATATAATTGGAAAAGGATGTTCCGGTGTCGTTTATCGTGCTGAAATGGACGACGGTGAAGTCATAGCTGTGAAGAAACTGTGGCCTACAACAATGGATGTAGGAGAAGGATTCAAGGATGATAAAAGTGGAATTCGCGACTCATTCTCAACTGAGGTGAAAACACTTGGTTCGATCCGTCACAAGAACATTGTTAGATTCTTGGGATGTTGTTGGAATAAAAACACAAGATTGCTGATATATGATTATATGGCAAATGGAAGTCTAAGTAGTCTTCTTCATGAGAGGACAGGAAATTGTCTGGAATGGGAACTCAGGTACAGAATTCTTTTGGGAGCTGCAGAAGGCCTTGCTTATTTGCACCATGATTGTGTGCCTCCCATAGTACATAGAGACATCAAAGCCAATAACATCCTCATTGGCATTGAGTTTGAGCCTTATATTGCAGACTTTGGCTTGGCTAAGCTGGTTGATGATGGTGGCTTTGGTCGTTCCTCCAATACAGTCGCTGGTTCTTATGGATACATTGCTCCAGAATATGGATACATGATGAAGATCACGGAGAAGAGCGATGTTTACAGCTACGGTGTAGTTATGTTGGAAGTCTTGACGGGCAAGCAACCGATAGATCCGACAATAGCAGAGGGCCAACATGTGGTTGATTGGGTGAGACAGAAAAGAGGGGTTGAAGTACTTGACTTGAGCTTACTGTCAAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCACTAGGCATAGCCTTGTTGTGCGTAAACTCATCCCCAGATGAGAGGCCAACAATGAAAGATGTTGCAGCAATGCTAAAAGAGGTCAAACAAGAAAGAGAAGAATATGCAAAAGTTGATGCACTTTTAAAGGGATCTCCTGCAAATAATGATGTCAAAGCAGCAGCAGCGTCTTCATCATTGCCAGCTTTGAAGAATTTGTATCGGGAAGGCGATAATAACACGATCTTCTCTGTATCTTCACTGCTTCATTCGTCTTCTTCTTCCAGTGCCAAAGTGGGTTTGAAGTGA 3393 0.4188 MPSSRQSFCISSSSSSPLFCIVLFHSIFLYGLAFSANHEASILFSWLHSSASPPHPSFSNWNILDANPCNWTFLTCSPQGFVTEINIQSIPLQLNFPSYLSSFLHLQKLVISDANLTGTIPVNIGDCSALTLIDLNSNNLVGSIPSSIGKLQNLESLSLNTNQFTGKIPLEIGNCISLKSLILFDNQLSGFIPPEIGKLSKLEILRAGGNKDLVGKIPEEIGECRNLTELGLADTGLSGSLPASLGKLSKLQTLSIYTTVLSGEIPAELGNCSELVDLFLYENSLFGSIPPELGKLQKLEQLFLWQNSLVGAIPEEIGNCTSLKRIDLSLNSLSGTIPLSFGRLLELEEFMISDNNVSGSIPPSLSNALFLQQLQVDTNQLSGLIPPELGRLSKLTVFFAWQNQLEGSIPSSLANCSNLQALDLSHNELTGSIPPGLFQLQNLSKLLLISNDISGSIPLEIGLCSSLIRLRLGKNRITGVIPKSIGSLKNLNFLDLNENHLSGQVPDEIGNCTELQMIDFSSNSLDGPLPNSLSSLSLLQVLDGSSNRFSGHIPESFGRLVSLNKLILGRNLFSGPIPASLSQCSSLQMLDLSGNELSGSIPAELGHIENLEIALNLSFNSLSGPIPDQISALTKLSILDLSHNLLEGGLNSLAGLDNLVSLNISYNNFTGYLPDNKLFRQLSPKDLTGNQGLCSSGQDSCFVSASSMTMNGREARKSRRIKLALGLLVVLTVLLTIMGIIAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVDQVLRRLVEGNIIGKGCSGVVYRAEMDDGEVIAVKKLWPTTMDVGEGFKDDKSGIRDSFSTEVKTLGSIRHKNIVRFLGCCWNKNTRLLIYDYMANGSLSSLLHERTGNCLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGIEFEPYIADFGLAKLVDDGGFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVMLEVLTGKQPIDPTIAEGQHVVDWVRQKRGVEVLDLSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMKDVAAMLKEVKQEREEYAKVDALLKGSPANNDVKAAAASSSLPALKNLYREGDNNTIFSVSSLLHSSSSSSAKVGLK 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g01023 1130 Pfam Protein kinase domain 784 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01023 1130 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 515 1060 - -
Accr10g01023 1130 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 869 1078 - -
Accr10g01023 1130 SUPERFAMILY L domain-like 46 405 - -
Accr10g01023 1130 SUPERFAMILY RNI-like 360 676 - -
Accr10g01023 1130 FunFam LRR receptor-like serine/threonine-protein kinase 534 609 - -
Accr10g01023 1130 SMART serkin_6 782 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01023 1130 Gene3D Ribonuclease Inhibitor 35 194 IPR032675 -
Accr10g01023 1130 Pfam Leucine rich repeat 539 597 IPR001611 GO:0005515
Accr10g01023 1130 ProSiteProfiles Leucine-rich repeat profile. 418 440 IPR001611 GO:0005515
Accr10g01023 1130 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Accr10g01023 1130 ProSitePatterns Protein kinases ATP-binding region signature. 788 811 IPR017441 GO:0005524
Accr10g01023 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 913 925 IPR008271 GO:0004672|GO:0006468
Accr10g01023 1130 Gene3D Phosphorylase Kinase; domain 1 768 868 - -
Accr10g01023 1130 Gene3D Ribonuclease Inhibitor 443 704 IPR032675 -
Accr10g01023 1130 Gene3D Ribonuclease Inhibitor 210 442 IPR032675 -
Accr10g01023 1130 SMART LRR_typ_2 296 320 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 560 584 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 633 655 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 488 512 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 416 440 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 585 608 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 151 175 IPR003591 -
Accr10g01023 1130 SMART LRR_typ_2 656 681 IPR003591 -
Accr10g01023 1130 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 765 868 - -
Accr10g01023 1130 ProSiteProfiles Protein kinase domain profile. 782 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g01023 1130 FunFam Nuclear pore complex protein NUP107 36 192 - -
Accr10g01023 1130 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 211 434 - -
Accr10g01023 1130 SUPERFAMILY Protein kinase-like (PK-like) 760 1060 IPR011009 -
Accr10g01023 1130 Gene3D Transferase(Phosphotransferase) domain 1 869 1080 - -
Accr10g01023 1130 Coils Coil 1053 1073 - -
Accr10g01023 1130 PRINTS Leucine-rich repeat signature 419 432 - -
Accr10g01023 1130 PRINTS Leucine-rich repeat signature 633 646 - -
Accr10g01023 1130 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 699 - -
Accr10g01023 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 435 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g01023 Accr-Chr10 31416737 31420560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g01023 33 1079 Receptor kinase-like Gene Family AT5G56040 48.870 0.0 957
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr10g01023 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g01023 - - gmx:100818541 1649.41