Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00978 ATGACGATGGTTCATCAGAACAATTCAAGAACAAAGAAGGAGCTTGTTGATGAGCGATCTCCTCTGCTAGTGGATGAGAAAGATGGGGGCTCTAAGGGGGCGTCTTTAAGCGGGTCAGTGTTCAATTTATCTACCTCCATTATTGGAGCTGGAATTATGGCCTTGCCTGCTGCCATGAAAGTTCTGGGATTAGGTTTTGGAATTATCGGCATAGTCTTTCTTGCGTTACTCGCGGAGTGTTCCCTAGAGATTCTTATCAGGTTTAGCAGAGTAGGAAAGGCTGAGACCTATGGGGAAGTAATGCGTTATTCCTTTGGAAGTGTTGGAAATTGGGCTTTTCAAATATGCATTCTTCTCAACAATTTTGGGATTCTCGTCGTCTACATGATCATAATTGGTGATGTGCTGTCTGGAACATCTTCAAGTGAAACTCATCATGCTGGTGTGTTGGAAGGATGGTTTGGCGAATACTGGTGGACTGGCCGTACTTTTGTTCTCCTTGTGGTAACCTTATTCATATTTTCTCCTTTGGCATTCTTCAAGCGGATAGATTCTCTCAGATATTCTTCCGCTTTAGCAGTGGGACTGGCAATTGTATTTATTGTCATAATGGCTGGGATAACATTTATAAAATTGTTTAATGGTAGCATTGCCCCACCCAGGTTGCTCCCTTATGTTACTGATTTTACATCTGTATGGAAGCTCTTCACTGCAGCCCCTGTCCTTGTGACGGCATTTGTCTGTCATTTCAATGTGCATACAATAGACAATGAGCTAGCAGACTCTTCCTTGATACAAAAAGTTGTACGTGCATCTCTCGTTCTATGTTCCAGTGTCTATATATTGACGGCCTCATTTGGGTTTCTTTTGTTTGGTGAATCAACTCTTGATGACGTGCTGGCCAACTTTGATGCTGACCTTGGCATCCCTTACGGCAGCTTGTTCAATGACATCATTCGTGTCAGCTATGCCCTCCACCTTATGCTTGTTTTCCCAGTTATCTTCTTCTCACTGCGCTTCTATTTGAGCGATTTACTTTTCCCATCAGCTAGGTCAATTGATTTAGACAATGTAAGGTTTGTGTTGATGACAACTGGGCTCATCATTTCTTCATATGTGGCGGCAAATTTTATACCTAGCATTTGGGATGCTTTCCAATTCACTGGGGCAACTGCTACTGTATGCCTAGGGTTCATTTTTCCTGCTGCAATTGCTCTAAGGGATCCAAATGGTATTGCAACAAAGAAGGATAAGGTTTTATCTTTTGTCATGATTGTGCTGGCTGTGTCCTCAAATGTGGTGGCCATATACAGTAATATCAATACCATCTTTAATAAAAATGTTGATCCTCATGAATGA 1359 0.4202 MTMVHQNNSRTKKELVDERSPLLVDEKDGGSKGASLSGSVFNLSTSIIGAGIMALPAAMKVLGLGFGIIGIVFLALLAECSLEILIRFSRVGKAETYGEVMRYSFGSVGNWAFQICILLNNFGILVVYMIIIGDVLSGTSSSETHHAGVLEGWFGEYWWTGRTFVLLVVTLFIFSPLAFFKRIDSLRYSSALAVGLAIVFIVIMAGITFIKLFNGSIAPPRLLPYVTDFTSVWKLFTAAPVLVTAFVCHFNVHTIDNELADSSLIQKVVRASLVLCSSVYILTASFGFLLFGESTLDDVLANFDADLGIPYGSLFNDIIRVSYALHLMLVFPVIFFSLRFYLSDLLFPSARSIDLDNVRFVLMTTGLIISSYVAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDPNGIATKKDKVLSFVMIVLAVSSNVVAIYSNINTIFNKNVDPHE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00978 452 Pfam Transmembrane amino acid transporter protein 34 443 IPR013057 -
Accr10g00978 452 PANTHER AMINO ACID TRANSPORTER 25 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00978 Accr-Chr10 30385493 30388979 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00978 4 452 Amino Acid or Auxin Permease AAAP Family AT3G30390 60.000 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00978 K14207 - gmx:100778699 652.129