Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00963 ATGGTTAAAAGTGACATCAGAGGGTTTCACTATCCAGCACCTGAAAATCCCCTCTTGGTTTCTCCAAATTTTGGCTTGTTTCAACAGGGTGATGTCCAAAACCAGCTTCACTTGAACACCCTCTTGAGCAATTTGCCAAACTGCCACTTCCCATCTGGTTCAGGAAGCCTCGAGTTTATCCCTCCTCTTCCACCTACTTCTTCAAGCTGCCTCAGCAGCAACTCAACTTCTGATGAAGCTGATGAGATTCAGCTCAGCATCATTGATGAAAGGAGGCAGAGACGAATGATATCGAATAGAGAATCAGCTAGGAGGTCCAGGATGAGGAAGCAGAAGCACTTGGATGAACTGTGGTCACAGGTGGTGAGGCTCAGGAATGAGAATCACAATCTCATTGACAAACTGAACCATGTGTCTGAGTCACATGATAGAGTTCTTCAGGAGAATGCACGCCTCAAGGAAGAAACTTCTGATCTTCGTCAACTGCTCGCGGACCTGAAAATTAGCTCTTCTTTTGCTGACATCATGAGAGATATTGATGAACTCAGAGCTGAGCTCTCAAACTAA 567 0.4533 MVKSDIRGFHYPAPENPLLVSPNFGLFQQGDVQNQLHLNTLLSNLPNCHFPSGSGSLEFIPPLPPTSSSCLSSNSTSDEADEIQLSIIDERRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVSESHDRVLQENARLKEETSDLRQLLADLKISSSFADIMRDIDELRAELSN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00963 188 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Accr10g00963 188 SUPERFAMILY Leucine zipper domain 91 141 IPR046347 GO:0003700|GO:0006355
Accr10g00963 188 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Accr10g00963 188 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Accr10g00963 188 FunFam BZIP transcription factor 89 140 - -
Accr10g00963 188 Pfam bZIP transcription factor 91 149 IPR004827 GO:0003700|GO:0006355
Accr10g00963 188 Gene3D - 89 145 - -
Accr10g00963 188 Coils Coil 135 169 - -
Accr10g00963 188 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 23 172 IPR044521 -
Accr10g00963 188 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00963 Accr-Chr10 29887547 29888113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00963 65 179 bZIP Transcription Factor Family AT3G30530 67.521 1.65e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr10g00963 bZIP_1 2.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00963 - - gmx:778126 253.447