Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00958 ATGGCACAAGATACTTCTGCTGTTGATTCACATCACAGACGCCCTGGTCTATTGAAAGATCAAGTCTTCTTGGTTAAAAGGAAAGACTCCGATCGCTCTGAGATTGCTCCTATCCAAGATCAACTATCGTTTGTGAAGGGTGTTTTTGTAGTAATCCGTGCATGCAAGTTGTTGTCCGAAAATAATGATGGAATAATATTGGTAGGGGTAGCTGGTCCTTCAGGGGCTGGGAAGACTGTATTTACTGACAAGATAGTCAATTGCATGCCCAGCATTGCAGTCATTTCGATGGACAATTACAATGATTCCAGTCGAATTATTGATGGAAATTTTGATGATCCACGCTTGACAGACTATGACACATTGCTCCAGAATCTACAAGATTTAAAGGCAGGAAAGTCAGCTCAGGTTCCTATCTATGATTTCAAGTCCAGTTCTCGTTTAGGATACAGAAAACTTGAAGTCCCAAGCTCCCGAATAGTGATCATAGAGGGTATCTCTGCTTTGAGTAAGAAGTTGCGACCTCTACTAGACCTTCGTATATCTATTACAGGTGGAATTCATCTTGACCTAGTCAAGCGAGTTATGCGTGACATTCAACGTGCTGGTCAACAACCTGAAGAAATCATTCATCAAATATCTGAGACGGTATTTCCAATGTACAAGGTCTTTATTGAGCAAGATCTGCAGACAGCACATATCAAAATAAACAACGAGTTCAATCCATTTACTGGGTTCCAGAGTTCTACTTACATATTGAAATCAGCAAGGAATGTGACAGTTGAACAAATTAAATCTGTTTTCTCTGGAGATTTTAAGGAAACAAATGAGCAGATTTATGACATATATCTTCTACCGCCTGGTGAAGATCCAGAAACTTGCCAATCTTATTTACGGATGCGGAATAAGGAGGGGAAATACTCTCTAATGTTTGAGGAATGGGTGACAGATAGTCCATTTGTCATTTCACCAAGAATAACTTTCGAGGTTAGTGTGCGGCTCCTTGGTGGCCTGATGGCCCTGGGATACACAATAACTACCATTCTAAAAAGAAACAGCCATGTATTCTCTGATGATAGGGTGTCTGTGAAACTAGATTGGCTTGAGCAACTTAATCGAAAATATGTTCAGGTGCAAGGAAAAGATCGCTCAACTGTAGAATGCATAGCCCAGCAGCTTGGCATGGAAGGTTCCTATATTGCTCGTACATACATTGAGCAAATAAAATCGGAAAAGATTGTAGATGAGGTTATGGCCCTCCCAGATGATTTAAAAACAAAGCTTGGCCTAGATGAGGATATGGTGTCTAGCCTAAAAGAAGCACTTTCTAAAGCCTTTGCAGATAGAATTCCTGTGAAAAAAACGCCCATGAGTGGTATGTCCCGGTCGTATACAAGCCAAAGGGACAAAAATCTACTTAAACATACTCAATATGATGCCGGCAACAAAGGGTTTGGTGAAAGAAATCCAGATTCCTCCATAGTGCTAACAAATGAGCTTTCAGGACAAATTTCTTCTCTCAATGATAGAATGGATGAGTTTACAAGCCGTCTTGAAGAGCTGAATTCCAAGTTAAGCATCCATAAAAATTTTCCAAGCCAACAAACCTCCCAAGCTGAAGGCTACAATGATTCTGCTCCCACCTCTCACTTCATCACCAGTTTGGAAAGTGGTTCTTTAACTGGATCTATTATGAAGTCCTCATCTTCATTGCAATTAGCTAAGGAGTTACCTTTAAAGGATGAGATATTTGGTATTGCAAAAGGGCAGCGCCAGATCATGCAGAAAATGGACAATCTCTATAGCCTTCTCCTTGGAATTAGAAACATTAGCGAAAGGTCTCTCCAAACAAGAACCGACAGGACAAGCATGGCTTCTGCTTCAGAATCCACTTCAGTTCGTGCCATACTTGCTGTCACTTTTGGTTGTGTTGGGTTAGTCATGACGAAGGTTTTGGTGTCTAGAAAATGA 1971 0.4074 MAQDTSAVDSHHRRPGLLKDQVFLVKRKDSDRSEIAPIQDQLSFVKGVFVVIRACKLLSENNDGIILVGVAGPSGAGKTVFTDKIVNCMPSIAVISMDNYNDSSRIIDGNFDDPRLTDYDTLLQNLQDLKAGKSAQVPIYDFKSSSRLGYRKLEVPSSRIVIIEGISALSKKLRPLLDLRISITGGIHLDLVKRVMRDIQRAGQQPEEIIHQISETVFPMYKVFIEQDLQTAHIKINNEFNPFTGFQSSTYILKSARNVTVEQIKSVFSGDFKETNEQIYDIYLLPPGEDPETCQSYLRMRNKEGKYSLMFEEWVTDSPFVISPRITFEVSVRLLGGLMALGYTITTILKRNSHVFSDDRVSVKLDWLEQLNRKYVQVQGKDRSTVECIAQQLGMEGSYIARTYIEQIKSEKIVDEVMALPDDLKTKLGLDEDMVSSLKEALSKAFADRIPVKKTPMSGMSRSYTSQRDKNLLKHTQYDAGNKGFGERNPDSSIVLTNELSGQISSLNDRMDEFTSRLEELNSKLSIHKNFPSQQTSQAEGYNDSAPTSHFITSLESGSLTGSIMKSSSSLQLAKELPLKDEIFGIAKGQRQIMQKMDNLYSLLLGIRNISERSLQTRTDRTSMASASESTSVRAILAVTFGCVGLVMTKVLVSRK 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00958 656 Pfam Phosphoribulokinase / Uridine kinase family 68 237 IPR006083 GO:0005524|GO:0016301
Accr10g00958 656 CDD UMPK_like 67 238 - -
Accr10g00958 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 238 IPR027417 -
Accr10g00958 656 Gene3D - 257 414 - -
Accr10g00958 656 SUPERFAMILY CYTH-like phosphatases 265 407 IPR033469 -
Accr10g00958 656 ProSiteProfiles CYTH domain profile. 245 410 IPR023577 -
Accr10g00958 656 Coils Coil 504 524 - -
Accr10g00958 656 Gene3D - 66 256 IPR027417 -
Accr10g00958 656 PRINTS Uridine kinase signature 132 147 - -
Accr10g00958 656 PRINTS Uridine kinase signature 65 82 - -
Accr10g00958 656 PRINTS Uridine kinase signature 188 198 - -
Accr10g00958 656 PANTHER URIDINE KINASE 42 423 - -
Accr10g00958 656 Pfam CYTH domain 270 404 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00958 Accr-Chr10 29805000 29816384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00958 66 225 PRT Gene Family AT5G40870 27.811 4.02e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00958 K00876 - gmx:100781286 933.324