Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00946 ATGATGCCCCCTGAGCAAGAAACCACTACTGCTGTTCAAGTTATGCCTACCATTCCGGCCATCCCGAACCGAACGCCGCCGGAGAACGGCTCCGTTCATGCCGACCCTGGAGGTTCCACCACTATCAACGACAAGCCGAGTTCTGATAATTATGGCATTCCCTCAACAGGTTCCGTTCTTCATCACCAATCCTTGCGACCTGTTACCCTCAAATTTGAGGACGTTTCTTACAGTATAACCTTTGGGAGCCAAAAGAATGGAGGTTGTTTTTCATCGGAAAACCCGAAACCGACCCGGAAGATTCTCAACGGCGTGACGGGGATAGTCCGGCCAGGGGAATTGATGGCAATGCTAGGCCCATCAGGCAGCGGAAAGACCACGCTACTCACGGCGCTAGGCGGTCGGCTCTCCGGGAAAGTCACCGGCAACATAACTTACAATGGCCTTCCTTTTTCTAGCTCGATGAAGCGCAAGACTGGTTTTGTGTCACAAGACGATGTGTTATACCCTCACCTCACTGTCCTTGAGACTCTGGTTTTTACAGCTTTGTTAAGACTTCCCAAAAGTCTCACCAAAGAAGAAAAAGTAGAACAAGCCGAGATCGTCATCACGGACCTTGGGTTAAGCCGGTGCCGAAACACCGCCGTGGGTGGCGGCGCCTCCTTGTTCCGGGGAATTTCGGGAGGGGAGCGAAAGCGGGTCAGTATCGGGCAGGAGATGTTAGTGAACCCGAGTTTGTTGTTGCTGGATGAACCCACCTCCGGGCTGGACTCGACGGCCGCTCAACGAATAGTGGCGGTGCTCTGGGGCTTGGCACGCCGTGGCCGTACGGTGCTGACCACTATTCATCAGCCGTCAAGCAGGTTGTACAGGATGTTCGATAAGGTGATTGTACTATCAGACGGGTGCCCGATTTATGCTGGACAATCAGGTCGGGTTATGGAATATCTTGAGTCCATCGGGTATCCGCCCACTGTTAACTTTATGAACCCGGCAGATTTTCTGCTTGACCTTGCTAATGGCATTGTGGATGATGTTAAGCTGGATGATCAGACTGATATGAATGGAAGATTAGATCACAATGAAGATCAAGCTTCAATAAAACAATCTCTTGTTTTATCCTATAAAAAGATTTTATATCCTGCTCTGGAACAAGAGGTTCAGCTAAACAATGAAGGCAGAGATAGTTCATCCAGAAGCTCAGAGAAGCAGTGGAACACAAGCTGGTGGGCGCAATTTAGGGTTTTGCTTAAGAGGGGTTTACAGGAGAGGAAGCATGAATCTTATTCAGGCTTAAAGATTTTCCAAGTCTTATCAGTATCAATCCTCTCAGGACTTCTCTGGTGGCATTCTGATCCCTCACATATACAAGATCAGGTAGGCCTGCTCTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCACTATTCAATGCGATCTTCGCATTCCCATTGGAGAGACCATTGCTGATAAAAGAAAGATCCTCAGGAATGTACCATCTCTCATCCTACTACGTAGCCAGAATGATAGGTGACCTACCCATGGAACTTGTCCTCCCCACAATCTTTGTCACCATAAGCTATTGGATGGGAGGCCTCAATCCTTCACTAATCACCTTCATGTTAACCCTCTTAATCATCATCTTAAATGTACTCGTCTCTCAAGGAATCGGCCTAGCACTTGGAGCCATATTAATGGAAGTGAAGCAAGCCACAACCTTAGCTTCAGTGACCATGCTGGTTTTTCTTCTAGCTGGTGGCTACTATATTCAAAATATTCCTTCTTTCATAGCTTGGCTAAAGTACATATCTTTCAGTCACTATTGCTATAAGCTTCTGGTTGGCGTGCAATATGAAGAAAATGAGGTTTATGAGTGTGGCTTAGGGTTGCATTGTAGGGTAATGGATTTTCCTTCTATAAAGTGTTTGGGAGGTCTTGATCATTTGTGGGTTGATGTGGCTGCTTTGTTTGTGATGTTGATTGGATACAGAGTTGTGGCTTATTTGGCTTTGAGGATGAGGCTGCCTCACTGA 2031 0.4727 MMPPEQETTTAVQVMPTIPAIPNRTPPENGSVHADPGGSTTINDKPSSDNYGIPSTGSVLHHQSLRPVTLKFEDVSYSITFGSQKNGGCFSSENPKPTRKILNGVTGIVRPGELMAMLGPSGSGKTTLLTALGGRLSGKVTGNITYNGLPFSSSMKRKTGFVSQDDVLYPHLTVLETLVFTALLRLPKSLTKEEKVEQAEIVITDLGLSRCRNTAVGGGASLFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAVLWGLARRGRTVLTTIHQPSSRLYRMFDKVIVLSDGCPIYAGQSGRVMEYLESIGYPPTVNFMNPADFLLDLANGIVDDVKLDDQTDMNGRLDHNEDQASIKQSLVLSYKKILYPALEQEVQLNNEGRDSSSRSSEKQWNTSWWAQFRVLLKRGLQERKHESYSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPLLIKERSSGMYHLSSYYVARMIGDLPMELVLPTIFVTISYWMGGLNPSLITFMLTLLIIILNVLVSQGIGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQNIPSFIAWLKYISFSHYCYKLLVGVQYEENEVYECGLGLHCRVMDFPSIKCLGGLDHLWVDVAALFVMLIGYRVVAYLALRMRLPH 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00946 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 326 IPR003439 GO:0005524
Accr10g00946 676 SMART AAA_5 111 303 IPR003593 GO:0016887
Accr10g00946 676 MobiDBLite consensus disorder prediction 1 58 - -
Accr10g00946 676 Pfam ABC transporter 102 254 IPR003439 GO:0005524
Accr10g00946 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 667 - -
Accr10g00946 676 MobiDBLite consensus disorder prediction 34 58 - -
Accr10g00946 676 Gene3D - 72 320 IPR027417 -
Accr10g00946 676 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Accr10g00946 676 Pfam ABC-2 type transporter 412 617 IPR013525 GO:0016020|GO:0140359
Accr10g00946 676 FunFam ABC transporter G family member 22 89 320 - -
Accr10g00946 676 Pfam ABC-2 type transporter 283 346 IPR043926 GO:0140359
Accr10g00946 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00946 Accr-Chr10 29590743 29594591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00946 96 302 Calmodulin-binding Proteins AT2G36910 31.797 1.22e-13 72.8