Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00926 ATGGCTGGAACATCGTGGTTGGTGGACAAAAGTAGAATAGCAACCAAAATAAAGAGTGCTTCTGGGGCATTTGATCCTGAGCAGGTTAAATGGAAAAGCAATCCTACCAGAGCTTGCCCAAATTGTCAAAACATAATCGATAACAGCGATGTAGCACAGGACTGGCCTGGATTGCCAAAGGGTGTGAAATTTGATCCATCAGATCAAGATATAATATGCCACTTGCTTGCTAAAGTTGGTATGGCAAATTCAAGACCTCATCCTTTCATTGATGAATTTATCACTACTCTTGAAGTGGATGATGGAATTTGTTATACTCATCCAAAACATTTACCAGGTGTTAATCAAGATGGAAGTGCAACCCACTTCTTCCATAGAGCAATCAAGGCATACAATACTGGTACTCGAAAGCGTAGAAAAATACATGGCCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGAACTAAACCCGTAGTGTTGGACGGGGTTCAGAAGGGCTGTAAAAAGATTATGGTTCTTTATATGACCATGGTTAGAGGAGGTAAAGCAGAGAAAACTAATTGGGTTATGCATCAATATCACCTAGGAACACAAGAGGATGAGAAGGAAGGAGAGTATGTTGTCTCCAAAGTTTTTTACCAGCAGCAGCAGCAGGTTAAATCGGGGGATAAAGATGACCTGGGTATTCCTGCAAGAACCTTGGATGTTCCTGAAAGTTCCGAAAACATTAAAGCTGCAACAGTGCCAGTTGATCCGGTCACCCCCAAATCGGTGACCCCTGATCCACCTTGTACCAAAAGACCACATTCAAGCATTGACGTGGTTTTTGTTCCTCAGGATCCTCCAAAGGATTGTGTGGAAGATGCTTCTGAAGTAGTTTGTGAAGAACCAAAAACTGATGTACTCAAGGAAGAAAATCAAAATGATAATGAAGAAACAGATAATAATGAAAACGATGATGCTATTGAAGAACCTAAATGGTGGGATAGTGAGTCACAGCATCTTTTGAATTCACAGCAACTCGTTGAAGGATTGTCCATGTGTGACGACTTCCTTTGCAGCCAATCTCCCAATAGAGATGACAATAGTGAAGAACATAAGATCCTACCTGGCCTTTCTGTCTATGCTCAACTAGGACCAGAGCATCTGAAAAAGGATCTTGAAGAATGCCAAGATCTTTCAAATATAGAACTCGATACGCCTCCTGACTTTCGACTAAGCCAGCTGGAGTTTAATTCACAAGATAGCTACATTTCCTGGGGTGGCAGCAAGGCAGGGAACTGA 1290 0.4209 MAGTSWLVDKSRIATKIKSASGAFDPEQVKWKSNPTRACPNCQNIIDNSDVAQDWPGLPKGVKFDPSDQDIICHLLAKVGMANSRPHPFIDEFITTLEVDDGICYTHPKHLPGVNQDGSATHFFHRAIKAYNTGTRKRRKIHGQDFGDVRWHKTGRTKPVVLDGVQKGCKKIMVLYMTMVRGGKAEKTNWVMHQYHLGTQEDEKEGEYVVSKVFYQQQQQVKSGDKDDLGIPARTLDVPESSENIKAATVPVDPVTPKSVTPDPPCTKRPHSSIDVVFVPQDPPKDCVEDASEVVCEEPKTDVLKEENQNDNEETDNNENDDAIEEPKWWDSESQHLLNSQQLVEGLSMCDDFLCSQSPNRDDNSEEHKILPGLSVYAQLGPEHLKKDLEECQDLSNIELDTPPDFRLSQLEFNSQDSYISWGGSKAGN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00926 429 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Accr10g00926 429 MobiDBLite consensus disorder prediction 298 322 - -
Accr10g00926 429 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Accr10g00926 429 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Accr10g00926 429 FunFam NAC domain-containing protein 8 67 220 - -
Accr10g00926 429 SUPERFAMILY NAC domain 44 216 IPR036093 GO:0003677|GO:0006355
Accr10g00926 429 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 393 IPR044799 GO:0003700
Accr10g00926 429 MobiDBLite consensus disorder prediction 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00926 Accr-Chr10 29034908 29039973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00926 5 218 NAC Transcription Factor Family AT4G28500 52.273 1.22e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr10g00926 NAM 5.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00926 - - gmx:100799488 593.964