Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00892 ATGAGACTCAGCTGCAACGGTTGCCGTATTCTCCGAAAAGGTTGCACCGATAACTGCACCATCCGTCCTTGCCTCCAATGGATCCACTGTCCCGAATCTCAGGCCAACGTCACCCTCTTCCTCGCCAAATTCTACGGCCGCACCGGCCTCCTCAACCTCCTCGACGTCGCCCCACCCGACCTCCGCCCAGCGGTATTCAAGTCGTTGCTGTACGAATCTTGTGGGAGGATTGTGAATCCGGTGTACGGCTCGGTGGGTTTGTTCTGGGCCGGGCAGTGGGATCGGTGCCAGGCTGCCGTGGATGCGGTAATGATGGGGTCGGACATCGGCGGCGGCTCCGGTGGGGTGGTGGTGGTTTCGGATTCGCAAGGGGGCGATCAAGGCTTTGTGGCTACTTCCAATATACGTCACGTTGCGAGAGAGGAGAAGGAGAAAGGCGAGGTGAACAGGGTGAGAGGGAGAGGCCGGTTCAAGAGGAATAATGGGAAATTGATAAAGCCGAAGGCCAGAGTGGGTTGGGTCGACTCGTCGGCTTTGTGGAAGCCGGTTCAGGACACGTCGGAGGGTGACAGCGTGTTCTCCGGCCAAACCGTCGAGGCCAGCTTGGCATCAAACCGGGAGAGTAGCAGGGATGGTGGAGATAGAGATGTGAAGCGGACCCAAAAAGCTCCGGTTAATTTGAATTTGAGTCTTGGAAAAGACTAA 705 0.5716 MRLSCNGCRILRKGCTDNCTIRPCLQWIHCPESQANVTLFLAKFYGRTGLLNLLDVAPPDLRPAVFKSLLYESCGRIVNPVYGSVGLFWAGQWDRCQAAVDAVMMGSDIGGGSGGVVVVSDSQGGDQGFVATSNIRHVAREEKEKGEVNRVRGRGRFKRNNGKLIKPKARVGWVDSSALWKPVQDTSEGDSVFSGQTVEASLASNRESSRDGGDRDVKRTQKAPVNLNLSLGKD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00892 234 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Accr10g00892 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 202 - -
Accr10g00892 234 MobiDBLite consensus disorder prediction 200 234 - -
Accr10g00892 234 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00892 Accr-Chr10 28166223 28167190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00892 1 160 AS2 family AT1G67100 57.143 6.66e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr10g00892 LOB 4.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00892 - - pcin:129310290 327.02