Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00879 ATGGAGAATTCGCCGCCGCGGATTGAAAAGTTTCCTTGGACTTCGAATTCCAGTTTCTCGGCTAAGGAGGGAAGAAGTGGGTATGAACCATCAGACACAGAGACAGAGAGACAAGACCCTCCCCGACATAAACGGGAAAGAAAGAATCTAACTTTAGGACATGAAGAAGCCAAAGTCCTCAACTTGAGGAGTAAAAGTCCCATGTCACTACACAGAAAGCATCCTTCTTCAAAGTTTGAACTAGAAATCTCATCTTCTGCATCTTCAGTAACAAGCTCAGCAGGAAGGAGACATCAAAGTAGATCGCCCTACCGGCCCTTCAGAGCCGCCGACGGTGACGCTCCATATCCCAAAAATGGTTTGGATAATGTTCAGACAAGTGTCAGCCCTGTGACAAAACCTGAATTTGCAAGAAGGCACACATCTCCATATCAACCTGAAAGAGAAAATCTCAATTGGAGATCAGAGAAAGCAAACCAGAGAAGAGCAATGACTGCTCCAAGGCAAAGGGGAGGAAGAGAACGGGAAGCATCATCCCATGGGACCAATCCTTCAATCGGAGAGATCAACGAGTTGGTTGCCCAGGCGAAATTCAAAAGAGATTCTATTACTGGTGACAGTGGTGAGCTCATAATAACAAGTACAGAGTCAAGTTTCGCAGGTGATATTTTCTTTTCTCGCGAGTATAATGCCATGACAAAGCAAAAGACCTTGTTAACAAAACCTCAAAAACTTGAGGTTGAAACCCAATTCAATAGCCCAAGGTTTAATAAGGTCCTTTCCCAAAGAGGAACCCCTTTTCATCATCAACATCAAAACAGAGCAAATGGTCATGTTAATAATGTGAACGTACGAGGTAGTTCATCATCTAGTACTACGATGTTGTCTCGACCGAGCACGGCCTCTAGTAATGGTGCTAAGAGCAAGAAGAGTTGTGCTAGTGGTAGTGTGAAGAGTGATGTGAGTTCGACGACAAGTGTGAGCATTCAGAAACTCATGGCGAACAGGAAAAAGAACCAAGCAGAGACATGGTTTGCTTGCATGAGAAGAGTAGGCAGGTCATCGAATAAATCGCCGGAACATCGATCGGTTGATGAGGCTTCTATCATTTACAAATCTTTTGTGCTCCAAAGCCTCCCACAATTCTGGGCAGATAAGTATCAACCCACGTCATTAGACGGCTTCATTTGCCACCAACAAGAAGCTCAGCTTCTCAAGGAATTAGTGTCTCAAGATGCGTGTCCTCACATTTTGCTGAAAGGACCAAGTGGTTCAGGAAAAAGAGCGCTAGCAATGGCTCTTCTGCAAGAAATATTTGGTGATGCAATATCAAATCTATCTCATGATTTAAGAAATTTCTCCATCCAGGAAAGGAGGCCAGTGAAGATCACTGTTCCTATAACGTCCAGCTCTCATCACATGGAGCTCAATGTAAATTTGGAACCTAATGCTAAATTTGCTTTAATGGGATTAGTCAAGGAAATAAGCACAGAATCTGCGATTACCCCTGAAGTCAGTAATTTGAATTTCAAGTCAGATTACAAAGTATTAGTTCTTTACGAGGTTGACAAGGCAGATAACAACATTCAATATATGATCAAATGGATTATAGATCGCTATTCTGATATATGCAAAATCATAGTTTGTTGCGAAGATGATGTGGACATTCTTGAACCGGTGAAAAACCGGTTCAAAATTATTAATATTGATGCTCCACCAACTCATGAAATTATGGATGTTCTTATTCAGATAGCAAAACAAGAAGAAATTGATCTGTCCATGAACTTTGCTGCTAAGATTGCCAATAAGTCAAAGCAGAATCTCAGGAAAGCAATCATGGCTCTTGAAGCATGCAGAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCCCTTGGATGGGAGGAGATTATAATGGAAATTTCTGTAGAGATACTATCTGATCCTTCACATTCACGCTTATTCTCAATCAGAGGGAAATTACAGAAGCTTCTGGGGGATTTTGTTCACCCCAACCTGATTCTCCGGAAACTGGTGGAACAACTCCTAAAAGGAATTGACAGCAACCTAAAAAGGGAGCTCTTCTACTGGCACGCTTATTATGACAAGAGACTCCCACCAGGAGCTACAGCTTTACTAAAATTAGAAGAATTTGTCGCCAAGTTTATGAGCATATACAGAAAAAGCACTAGCGGTCGACAGTTTGTGTAG 2214 0.4192 MENSPPRIEKFPWTSNSSFSAKEGRSGYEPSDTETERQDPPRHKRERKNLTLGHEEAKVLNLRSKSPMSLHRKHPSSKFELEISSSASSVTSSAGRRHQSRSPYRPFRAADGDAPYPKNGLDNVQTSVSPVTKPEFARRHTSPYQPERENLNWRSEKANQRRAMTAPRQRGGREREASSHGTNPSIGEINELVAQAKFKRDSITGDSGELIITSTESSFAGDIFFSREYNAMTKQKTLLTKPQKLEVETQFNSPRFNKVLSQRGTPFHHQHQNRANGHVNNVNVRGSSSSSTTMLSRPSTASSNGAKSKKSCASGSVKSDVSSTTSVSIQKLMANRKKNQAETWFACMRRVGRSSNKSPEHRSVDEASIIYKSFVLQSLPQFWADKYQPTSLDGFICHQQEAQLLKELVSQDACPHILLKGPSGSGKRALAMALLQEIFGDAISNLSHDLRNFSIQERRPVKITVPITSSSHHMELNVNLEPNAKFALMGLVKEISTESAITPEVSNLNFKSDYKVLVLYEVDKADNNIQYMIKWIIDRYSDICKIIVCCEDDVDILEPVKNRFKIINIDAPPTHEIMDVLIQIAKQEEIDLSMNFAAKIANKSKQNLRKAIMALEACRAHNYPFSEEQPIPLGWEEIIMEISVEILSDPSHSRLFSIRGKLQKLLGDFVHPNLILRKLVEQLLKGIDSNLKRELFYWHAYYDKRLPPGATALLKLEEFVAKFMSIYRKSTSGRQFV 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00879 737 SUPERFAMILY post-AAA+ oligomerization domain-like 633 727 IPR008921 GO:0003677|GO:0006260
Accr10g00879 737 Gene3D - 381 572 IPR027417 -
Accr10g00879 737 Gene3D - 574 631 - -
Accr10g00879 737 MobiDBLite consensus disorder prediction 268 320 - -
Accr10g00879 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 620 IPR027417 -
Accr10g00879 737 MobiDBLite consensus disorder prediction 140 177 - -
Accr10g00879 737 MobiDBLite consensus disorder prediction 27 61 - -
Accr10g00879 737 Gene3D - 634 727 - -
Accr10g00879 737 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 380 717 - -
Accr10g00879 737 FunFam replication factor C subunit 3 573 631 - -
Accr10g00879 737 FunFam Replication factor C subunit 3 381 572 - -
Accr10g00879 737 MobiDBLite consensus disorder prediction 1 186 - -
Accr10g00879 737 MobiDBLite consensus disorder prediction 9 24 - -
Accr10g00879 737 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00879 Accr-Chr10 27960421 27965459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00879 382 728 Core DNA Replication Machinery Family AT5G27740 41.547 1.79e-87 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00879 K10756 - gmx:100795321 770.77