Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00878 ATGAGGCTTCCTTCGTTTTCAATAGCTCACTCCCACCATTGCTCTGTTTCTATTAGATTTCACGGCAGTTCTTTGCTTACCCTTTTCCCTGCAACCTCTTCTTCTTCTACTACTTCTCCTTCTTCTTCTTGCAGGCCTTGCTGGCCGCGAATGGATGCTGACTCTGCCTATCACCGCCATCGCAGGAAAGAAAAGGTGGTTCTCATAATGGGCGCCACCGGCTGCGGAAAGTCACGACTGTCCGTTGACCTAGCCACCCGTTTCGCCTGCTTCGAGATCATCAACGCAGACAAAATGCAACTCTACAGAGGACTCGATATCGCCACAAACAAGATTCCTTTGGAAGAGCGGAACGGCGTCCTGCACCACCTCCTCGGAGACGTCGACCCAGCGAACGGAGAGTTCACGCCGTGGGATTTTCGCTCAGCTGCCGGCTCCATTATTTCCGATATCAACTCGAAGAAGAAGCTTCCCATCGTCGTCGGTGGGTCGAACTCGTTGATCCATGCTCTTGTGGTGGACCAGTTTGACCCGGCGATAAATGTGTTTGACGATGAAGGATCGTCTCCAAGCTCGATCTTGTCGGAGTTGAGGTATAACTGTTGCTTCCTCTGGGTGGACGTGTCGTTCCCGGTTTTATCAGATTACTTGTTGAAGCGAGTCGACGACATGCTTGACATGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCAGAAGCAAACGACCTAGAAGATGACTCGGAACACCGGGTCGGGTTAAGGAAGGCAATCGGAGTAGCCGAATTCGACCGGTACTTCAAGCAATATCCACCATCACTCGGCGGGCTGAGAAGAGAAGAGGATCCGATGCGGAAGGCTGCATACGAGGAAGCAGTGAGGGCGATCAAGGAGAACACTTGTCGGCTAGCGAAAAGGCAAATAGGGAAGATTTTGCGGCTTAAAGGGGCAGGGTGGGACCTACGGAGGCTAGACGTCACAGAGGCTATCCGAGCGGCGATGACGCCGTCAAAATGCTCCGATGACGGTGGCGAGAGGTGGTCGGATATTTGGGAGAGACAGGTGGCAGAACCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1110 0.527 MRLPSFSIAHSHHCSVSIRFHGSSLLTLFPATSSSSTTSPSSSCRPCWPRMDADSAYHRHRRKEKVVLIMGATGCGKSRLSVDLATRFACFEIINADKMQLYRGLDIATNKIPLEERNGVLHHLLGDVDPANGEFTPWDFRSAAGSIISDINSKKKLPIVVGGSNSLIHALVVDQFDPAINVFDDEGSSPSSILSELRYNCCFLWVDVSFPVLSDYLLKRVDDMLDMGMVDELAQFFDPEANDLEDDSEHRVGLRKAIGVAEFDRYFKQYPPSLGGLRREEDPMRKAAYEEAVRAIKENTCRLAKRQIGKILRLKGAGWDLRRLDVTEAIRAAMTPSKCSDDGGERWSDIWERQVAEPSVKIVKRFLKE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00878 369 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 210 321 - -
Accr10g00878 369 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 63 367 IPR039657 -
Accr10g00878 369 FunFam Adenylate isopentenyltransferase 210 321 - -
Accr10g00878 369 Gene3D - 63 367 IPR027417 -
Accr10g00878 369 Pfam IPP transferase 179 308 - -
Accr10g00878 369 Pfam IPP transferase 100 173 - -
Accr10g00878 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00878 Accr-Chr10 27897569 27898678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00878 198 368 C2H2 Transcription Factor Family AT2G27760 28.125 7.78e-13 67.4