Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00877 ATGGATGCTGACTCTGCCTATCACTGCCATTGCGGCAAAGAAAAGGTGGTTGTTATAATGGTCGCCACCGGCTGTGGGAAGTCACGGCTGTCCATTGACCTAGCCAACCGTTGTGCCTGCTCGGAGATCATCATCAACGCAGACAAAATGCAACTCTACAGAGGACTCGATATGGTCACAAACAAGATTCCTTTGAATGAACGGAACAGCGTCCCGCACCACCTCCTCGGAGATGTCGACCCAGCGAATGGAGAGTTTACGGCGTGGGATTTTTGCTCAGCCGCCGGGTCCATTATTTCTAATATCACCTCGAGGAAGAAACTTCCAATTGTCGTCGGTTGGTCCAACACGTTGATCCATGATCTTGTGGTGGACCAGTTTGACCCGGCGATAAATGTGTTTGACGATGAAGGATGGTTGTCGAGCTCAATCTTGTTGGAGTTAAGGTATAACTGTTGCTTCCTCTAG 468 0.4957 MDADSAYHCHCGKEKVVVIMVATGCGKSRLSIDLANRCACSEIIINADKMQLYRGLDMVTNKIPLNERNSVPHHLLGDVDPANGEFTAWDFCSAAGSIISNITSRKKLPIVVGWSNTLIHDLVVDQFDPAINVFDDEGWLSSSILLELRYNCCFL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00877 155 Pfam IPP transferase 51 123 - -
Accr10g00877 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 129 IPR027417 -
Accr10g00877 155 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 13 154 IPR039657 -
Accr10g00877 155 Gene3D - 13 155 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00877 Accr-Chr10 27868736 27869203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00877 19 123 C2H2 Transcription Factor Family AT2G27760 46.667 2.39e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00877 K10760 - qsa:O6P43_025717 192.971