Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00876 ATGGGGCTTCCTTCGCTTTCAATAGCTTACTCCTACCATTGCTCTCTTTCTGGTAGATTTCAGGGGGGTTCTTCGCTTACCCTTTTCCCTCCAACCCCTTCTTCTTCTTCTTGCAGGTCTCGCTGGCCGCGAATGGATGCTGACTCTGACTATCACCGCCATCGCCAGAAAGAAAAGGTGGTTGTCATAATGGGCGCCACCGGCTGCGGAAAATCACGACTATCCATCGACCTAGCCACCCGTTGCACCTGCTCGGAGATCATCAACGCAGACAAAATGCAACTCTACAGAGGACTCGATATCTCCACCAACAAGATTCCTTTGGATGAACGGAAAGGCGTCCCACACCACCTCCTCGGAGAAGTCGACCCAGCGAACGGAGAATTTACGGCGTGGGATTTTCGCTCAGCCGCCGGGTCCATTATTTCCGATATCACCTCGAAGAAGAAGCTTCCCATCGTCGTCGGTGGGTCCAACTCGTTTATCCATGCTCTTGTGGTGGACCAGTTTGACCCGGCGATAAATGTGTTTGACGGTGAAGGATCGTCACCAAGCTCAATCTCGTCGGAGTTGAGGTATAACTGTTGCTTCCTCTGGGTGGACGTGTCGTTCCCAGTTTTATCAGATTACTCGTTGAAGCGAGTCGACGACATGCTTGACATGGGAATGGTGGACGAGTTGGCTCAGTTCTTCGACCCAGAAGCAAACGACCTAGAAGATGACTCGGAGCACCGGATCGGGTTAAGGAAGGCAATCGGAGCAGCTGAATTCGACCGGTACTTCAAGAAATATCCACCATCACCGGGCGGGCTGAGAAGAGAAGAGGATCGGATGCGGAAAGCTGCATACGAGGAAGCAGTGAGGGCGATGAAGCAGAACGCTTGTTGGCTGGCGGAAAGGCAAATAAGGAAGATCTTGCGGCTTAAAGAGGCCGGGTGGGACCTAAGGAGGCTGGACGCCACAGAGGCTATCCGAGCGGCGATGACGCCGTCGAAATGCTCCAACGGCGGCGAGAGGTGGTCGGATATCTGGGAGAGACAGGTGGCAGAACCAAGCGTGAAGATTGTGAAGAGGGTCTTGAAGGAGTAG 1089 0.5344 MGLPSLSIAYSYHCSLSGRFQGGSSLTLFPPTPSSSSCRSRWPRMDADSDYHRHRQKEKVVVIMGATGCGKSRLSIDLATRCTCSEIINADKMQLYRGLDISTNKIPLDERKGVPHHLLGEVDPANGEFTAWDFRSAAGSIISDITSKKKLPIVVGGSNSFIHALVVDQFDPAINVFDGEGSSPSSISSELRYNCCFLWVDVSFPVLSDYSLKRVDDMLDMGMVDELAQFFDPEANDLEDDSEHRIGLRKAIGAAEFDRYFKKYPPSPGGLRREEDRMRKAAYEEAVRAMKQNACWLAERQIRKILRLKEAGWDLRRLDATEAIRAAMTPSKCSNGGERWSDIWERQVAEPSVKIVKRVLKE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00876 362 Gene3D - 57 360 IPR027417 -
Accr10g00876 362 Coils Coil 273 293 - -
Accr10g00876 362 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 57 359 IPR039657 -
Accr10g00876 362 Pfam IPP transferase 173 303 - -
Accr10g00876 362 Pfam IPP transferase 94 168 - -
Accr10g00876 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 239 IPR027417 -
Accr10g00876 362 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 204 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00876 Accr-Chr10 27854842 27855930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00876 192 361 C2H2 Transcription Factor Family AT2G27760 27.604 8.31e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00876 K10760 - qsa:O6P43_032737 459.144