Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00864 ATGGAGGATCCGATTGATCACTACCAAACAAAAAGAACGAACCCCACTAATTCCACCACGCGATTAAAGCTCTTCGGCTTCAATGTTCAAGAAGATATAGAAGATGAAGTAGTGCTTGAAGATGTATCAGATTCCACAGGCAAGCCTGCCACCCCATCTGGATCACCGGATTCCGGCGGCAGCGGGGGAGGAGTTGGTGGTGGTGGGGTCGGTGCAGCGTTCCTTCCTTCCTCCGGTGACAGGAAATACGAGTGTCAGTATTGTTGCCGAGAGTTTGCGAATTCGCAAGCCCTTGGTGGGCACCAGAACGCGCACAAGAAGGAGCGTCAGCAGCTAAAACGAGCGCAGTTGCAAGCCACGCGAAACGCCGCCGTTTCGTTCGTTCGGAATCCGATAATCTCCGCCTTCGCAACTCCGCAACACCTCCTGGCTCCAAACGGTTCCGTCGTGGTCCCCGCGGCTCCGGCGTCGTGGGTTTACATGCCACCACGTTCCGCGCCGTCTCCGTTCCACGTGTCGGTGTCTCACGGCTGTGTGTTCCCGTCTTCGTTGCCGTCGCCACCGAGTAACGCTGTGAATTATAGCGGTGGTATTACAGGTGGGAGATCTGCGGGTGTAGGGATGGTTCCCTATGGTGGCGGTGCAGGGGATTCGTCATCCACATTGTCGTCCCTCGGGCCGCCACAAGCACTGTCTCGGGTCAACGTCCGGGTTGACGGGCCTTCCTTGAGCCGGTTCTCAAAGGTGGAAGGTGGGCCCAATTTCGATGATTCATTGGGCCTGGACTTGCATCTTAGCCTAGCACCAGCTGCACCATGA 819 0.5665 MEDPIDHYQTKRTNPTNSTTRLKLFGFNVQEDIEDEVVLEDVSDSTGKPATPSGSPDSGGSGGGVGGGGVGAAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFATPQHLLAPNGSVVVPAAPASWVYMPPRSAPSPFHVSVSHGCVFPSSLPSPPSNAVNYSGGITGGRSAGVGMVPYGGGAGDSSSTLSSLGPPQALSRVNVRVDGPSLSRFSKVEGGPNFDDSLGLDLHLSLAPAAP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00864 272 FunFam Zinc finger protein GIS3 71 133 - -
Accr10g00864 272 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Accr10g00864 272 MobiDBLite consensus disorder prediction 1 20 - -
Accr10g00864 272 MobiDBLite consensus disorder prediction 38 65 - -
Accr10g00864 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Accr10g00864 272 PANTHER ZINC FINGER PROTEIN 5 11 271 IPR044299 GO:0010090
Accr10g00864 272 Gene3D Classic Zinc Finger 75 130 - -
Accr10g00864 272 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00864 Accr-Chr10 27353917 27354735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00864 18 270 C2H2 Transcription Factor Family AT1G68360 47.368 3.74e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00864 - - qsa:O6P43_025731 295.049