Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00858 ATGGCAGCACCCTCTCGCCTCTCTGTACTGGTTTTCTGCTTCTTCTTCTTAGTTTCTCATTTGATTCTTCCCACTGAAGCGTCCATAAACCAAGATTTAGGAGCTCTAATGGCGTTCAAAGCCGCTTCTGATGCTGGCAACAAGCTCGCGTCTTGGAACTCAAGCACCCACCCCTGTAACTGGGTTTTTGTCTCATGCCTCCAGAATCGAGTTTCACGACTTGTTCTTGAGAATCTCGATCTCCATGGCTCTATGGAGCCGTTAACTTCTCTCACTCAGCTTCGAGTTCTGAGCCTTAAGCGAAACCATTTTTCCGGCCCCATTCCGACTCTGTCTAATTTTACCTCTCTGAAGCTTCTGTTTCTTTCCTACAATGAGTTCTCCGGTGAGTTCCCGGTGACGGTTACGTCGCTTCTCCGTTTGTATCGCCTTGATCTTTCTCACAACAATTTCTCTGGCGACATTCCGACTGCGGTCAACAACCTCACTCACCTTCTCTCCCTCCGTCTCAATGACAACCAGTTCTCCGGTCACATTCCCTATTTAAACCTCTCCAAGCTACAAGACTTCAATGTCTCCGGCAACCATCTCTCCGGCGAAATACCCAAATCAGTCTTGGGTTTCCCCAAATCATCATTCGCCCAAAACCCATCTCTATGCGGAGCTCCATTGGTGAAATGTAAGGACACTCATCCCGTACCGTTTAAACCCGACGGATCTGTGGGACCCAATATTGCATCGCCATTGACGCCGAGAAGCAATCCTTCAACGCCCGTGAAGAACAAAACAGCCCCCAAAACACCATCTAATACCACCCACCACCACCGCCATCACAACGGAGCTTCAAAGATGAGCCCAGTAATTCTAATCGCCATTATAGTCGGCGACGTTTTGATTCTTGCCATAGTGTCCCTTCTTTTATACTGCTGCTTCTGGCAAAATTACTCTGCAAAATTGAAAGAAGGAAACAGGTCAAAGCTTCTAGAAGGCGAGAAGATCTTGTATTCATCAAGCCCATACCCACCATCATCATCAACCCAAATTGGATTAGAGAGGGGTCAAATGGTGTTCTTTGAAGGGATGAAGAAGTTTGAGCTAGAGGATTTGCTTCGAGCTTCTGCAGAAATGTTAGGGAAAGGTGGATTTGGGACGGCGTATAAAGCTGTTCTTGATGACGGCAATGTCGTCGCCGTGAAGAGGCTTAAGGATGCTCAGATTAATGGGAAGAAAGAGTTCGAGCAACACATGGAAGTTCTTGGAAGATTGAGGCATCCTAATATTGTGAGCTTGAGAGCTTACTATTATGCTCGAGATGAGAGATTGCTGGTTTGTGATTACATGACCAATGGAAGCTTGTTTTGGCTACTTCATGGAAACCGAGGACCCGGAAGAAGCCCACTGGATTGGACCACTCGGCTCAAGATAGCCGCCGGAGTGGGCCGAGGCTTAGCCTTTATCCACGGCTCATGCAAGGCCCTTAGGCTCATCCACGGTAACATCAAATCCACCAACATCCTTATCGACCAGGACGGGGAGCCACACGTGGCAGATTTTGGGCTCTACGGTTTTGCAGTACCAGCCACCAAATCAAACGGCTATCGTGCCCCAGAAGCAATGGACGGTCGGAAGAGTACGCAGAAATCTGACGTGTACTCATTCGGTGTTCTTCTGCTGGAGCTTCTCACAGGGAAGTGCCCCTCTGTGGGGGAGTCGAGTGGGCCCGGGGGAGGTGGAGCCGTGGACCTACCCAGATGGGTCCAGTCAGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTCGACATTGAGCTGATGAGGTACAAGGACATTGAAGAGGAAATGGTGGGGCTGCTTCAGATCGCGATGACTTGTTGCGCGGCGGTGCCAGATCAACGGCCCAGGATAAGCCACGTGGTGAAGATGATTGAGGATATACGTGGGGTGGAGATTTCACCGAGTCATGACACATCGGACTCGGTGTCTGAGTCGCCATCGTTGTCGGGCTAG 2004 0.498 MAAPSRLSVLVFCFFFLVSHLILPTEASINQDLGALMAFKAASDAGNKLASWNSSTHPCNWVFVSCLQNRVSRLVLENLDLHGSMEPLTSLTQLRVLSLKRNHFSGPIPTLSNFTSLKLLFLSYNEFSGEFPVTVTSLLRLYRLDLSHNNFSGDIPTAVNNLTHLLSLRLNDNQFSGHIPYLNLSKLQDFNVSGNHLSGEIPKSVLGFPKSSFAQNPSLCGAPLVKCKDTHPVPFKPDGSVGPNIASPLTPRSNPSTPVKNKTAPKTPSNTTHHHRHHNGASKMSPVILIAIIVGDVLILAIVSLLLYCCFWQNYSAKLKEGNRSKLLEGEKILYSSSPYPPSSSTQIGLERGQMVFFEGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQINGKKEFEQHMEVLGRLRHPNIVSLRAYYYARDERLLVCDYMTNGSLFWLLHGNRGPGRSPLDWTTRLKIAAGVGRGLAFIHGSCKALRLIHGNIKSTNILIDQDGEPHVADFGLYGFAVPATKSNGYRAPEAMDGRKSTQKSDVYSFGVLLLELLTGKCPSVGESSGPGGGGAVDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMTCCAAVPDQRPRISHVVKMIEDIRGVEISPSHDTSDSVSESPSLSG 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00858 667 SUPERFAMILY Protein kinase-like (PK-like) 375 641 IPR011009 -
Accr10g00858 667 Gene3D Phosphorylase Kinase; domain 1 345 446 - -
Accr10g00858 667 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 447 654 - -
Accr10g00858 667 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Accr10g00858 667 Gene3D Transferase(Phosphotransferase) domain 1 447 660 - -
Accr10g00858 667 CDD STKc_IRAK 377 644 - -
Accr10g00858 667 Pfam Protein kinase domain 374 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00858 667 SUPERFAMILY L domain-like 51 223 - -
Accr10g00858 667 ProSiteProfiles Protein kinase domain profile. 371 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00858 667 Gene3D Ribonuclease Inhibitor 88 233 IPR032675 -
Accr10g00858 667 Gene3D Ribonuclease Inhibitor 27 87 IPR032675 -
Accr10g00858 667 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Accr10g00858 667 MobiDBLite consensus disorder prediction 246 268 - -
Accr10g00858 667 FunFam Nuclear pore complex protein NUP107 29 181 - -
Accr10g00858 667 MobiDBLite consensus disorder prediction 235 280 - -
Accr10g00858 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 645 IPR046959 -
Accr10g00858 667 FunFam pollen receptor-like kinase 1 342 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00858 Accr-Chr10 27255375 27259428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00858 32 666 Receptor kinase-like Gene Family AT1G68400 64.961 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr10g00858 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00858 - - qsa:O6P43_032719 938.717