Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00853 ATGGCCTCTGTTGAAGGGAGGCGACGTCATCATGATCTTGTGCCTCTCGCTGCTTTGTTAAGCAGGGAGATGAAGACTGAGAAGATGGAGAAGCCCACTGTGAGTTATGGACATGCTGCTCAGTCTAGGAAAGGCGAGGATTACTTTCTAGTTAAGACTGATTGTCAGCGAGTACCTGGGAATCCCTCAACAACATTTTCAGTATTTGCGATCTTTGATGGACACAATGGAAATGCTGCGGCCATTTTCAGTAGGGAGCATTTGTTAAATCATGTGTTGAGTGCTGTTCCTCGAGGTCTTGGACGGGATGAGTGGCTTCAAGCTTTACCTCGGGCCTTGGTTGCGGGGTTTGTGAAGACTGACAAAGAATTCCAGAGCAGAGGGGAAACTTCAGGAACTACAGCCACATTTGTGATAGTTGATAGATGGACAGTCACTGTTGCATCTGTTGGTGATTCTCGTTGTGTATTAGACACCCAAGGAGGAGCTGTTACAAACTTAACTGTTGATCACCGGCTTGAAGAGAATATCGAGGAGAGGGAACGTGTTACAGCCAGTGGAGGTGAAGTTGGGAGGCTGAGCATTGTTGGTGGTGCAGAGATTGGTCCCCTTCGTTGTTGGCCAGGCGGATTGTGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCGAATGCCGGCGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTTTATCCTCAGACATGGCTGCAAAATCTTGCAGGGGTTTGCCAGCTGAACTTGCCGCAAGGCAGGTTGTCAAGGAAGCATTAAGAACAAGAGGGTTAAAGGATGACACAACTTGCATAGTCGTTGACATAATTCCTCCTGAAAATACAATGCCACCGCCACCTCTCCCTAAAAAGAAGAACAAGTTGAGGGCTCTGCTTTTCAGGAAGAAGTCTCGTGATGCTGCCGGTAAGCTATCAAAGAAGCTTTCAGCTATAAATATTGTGGAGGAACTGTTTGAAGAAGGATCAGCTATGCTTGCTGAAAGATTGGGGAGTGATGAGAATACAGGGCAATCAACATCAGGTCTCTTTGTATGTGCTGTGTGCCAAGTTGATCTTGCCCCAAGTGAAGGCATATCTGTTCATGCTGGTTCAATCTTCTCCACTAGCTCAAAGCCCTGGCAAGGCCCTTTTCTATGTGCTGGTTGTCGCGATAAGAAGGATGCCATGGAAGGGAAACGTCCTAGTGGAATCAAAGTGTCATAG 1287 0.4685 MASVEGRRRHHDLVPLAALLSREMKTEKMEKPTVSYGHAAQSRKGEDYFLVKTDCQRVPGNPSTTFSVFAIFDGHNGNAAAIFSREHLLNHVLSAVPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCVLDTQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPENTMPPPPLPKKKNKLRALLFRKKSRDAAGKLSKKLSAINIVEELFEEGSAMLAERLGSDENTGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCAGCRDKKDAMEGKRPSGIKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00853 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Accr10g00853 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Accr10g00853 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Accr10g00853 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Accr10g00853 428 CDD PP2Cc 34 297 IPR001932 -
Accr10g00853 428 SMART PP2C_4 27 295 IPR001932 -
Accr10g00853 428 SUPERFAMILY PP2C-like 34 297 IPR036457 -
Accr10g00853 428 Gene3D - 31 302 IPR036457 -
Accr10g00853 428 Pfam Protein phosphatase 2C 62 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00853 Accr-Chr10 27210973 27214392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00853 1 427 PP2C-type Phosphatase Gene Family AT1G68410 79.587 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00853 - - tcc:18609180 770.385