Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00846 ATGAAATTTAGTATGGCAGCTTCCGATTCTCTGCTTCCTTTCCTCTGTCTGTGTTGTTTTCTGCTTCCTGTGTCAGTTGCGTGGCCAGAACATCACTGTGTAGATATTGGGGAAATTAACTTCCCCTTCGACAACACAACTAACTCATCGGGTGGTTTACCACCCATAGAAGGTTGTGATTATCCAGGGGGACCCAAAAAGGTCCAATTGGGAAAAGAATGGTTCAATGTTGTGAAAATTATTTACCAAACGTATCATGAGCATGGAATCATCGTTATTGACCCCAATTTTCCACCGGACTGGAGACAAAATCCTTGCAGGGTCTTGAATTACAGCGTCCCTATTCTTCAGGACTCTCCTACGCTGTCTTTCTCTTTGTTAAACGTGATTTCCCTTTTGAAATGCAAGAACCGTATCCCCAACATCAAGCCCATCGATTACTTCTCAGATCACTGTAATGGCCACAACATTTACTATCCTCCCAAAGAAGACAGTCAGTGGCCGGACTCTAACCAATGTTCTCTTATCCAGCTTCCATTTGGACAGAAATCTCTTGGCTCAACCAAAATATCCTTATCCGATGAAATCTATATTCAAGTACATCTATCGCTGTCTTGTCTACTTGATGAAAATTGCAGGGTCGAAGAGCACCAGAAAATCGATTCCAAGTCCATAACAATAGGTGTAGCCATTGGAAGTGTTGGCGTGATTATAATTGGCTTGATTGTTATTCTATTGCGGAACAAACGAAGATATAAGCCGTTAGGCTCACAAAATCAGTCAAGAAGCGTTGAATCTGAGATCACTCACTCAAGAAGCAATCAATCTGATATTACTCACTCAACAGCAATCCTAGAAAGTAGAAATATCTACTTTGGGGTCCCTGTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAAAGAACTTGGAAGCGGAGGCTTTGGAACAGTTTACTATGGAAAGCTTAAAGATGGACGAGAAGTTGCTGTGAAGCGCCTATTTGAGCGCAACTACAAACGTGTACAACAATTCATCAATGAAGTTAAGATCCTCACGCGTTTGCGCCATAGAAACCTTGTGTCGCTCTATGGCTGCACTTCCCGTGCCAGTCATGAACTGTTGCTGGTCTATGAATACATTTCCAACGGAACACTTGGTTGTCATCTCCATGGCAATCTAGCAAAACCTGGTTCACTTCCATGGCCAGTGAGGATGAGGATTGCCGTAGAGACAGCAAATGCATTGTCCTATCTTCATGCCTGTGACATCATTCACCGCGATGTCAAATCCAGCAATCTTCTTCTTGATTCTCATTTTTGCATCAAGGTTGCTGACTTTGGTCTTTCGAGGTTGTTCCCCAAGTTTGCCACTCATGTTTCCACAGCTCCAGCGGGAAGCCCAGGTTATTTAGACCCCGAATATCACCAATGCTACCAGCTTACTGAAAAGAGTGATGTCTATAGCTTTGGGGTCTTGCTAATTGAGCTCATATCTTCTAAGCCAGCTATTGATGTTACAAGGCACAAGGATGATATTAAATTGGCAAATATGGCAGTTAACAAGATCCAAAGAGGAGCGTTCGCTGAGCTGGTAGATCCGTCGCTTGGTTTTGAGTCAGATAATGAGGTTAAGAATATGATAATCTCAGTGGCAAAGTTAGCTTTTCACTGCCTACAGAGGGATAGGGAGCTAAGACCTTCCATGGATGAAGTAATGGAGTTTCTGCAGAAAATTGAAAATGGGAATCATGATCTTAAGCATCTAGAGATTCATGGTGCTGGGTTTTCAAACAGGGAGATTCATAAATCTCTCCCAACCACAGTGCATAGGGATGGAGCTGCATCATTGAACAACTCAAAACCACAACGCCCACCCCGTACAATATGA 1905 0.4278 MKFSMAASDSLLPFLCLCCFLLPVSVAWPEHHCVDIGEINFPFDNTTNSSGGLPPIEGCDYPGGPKKVQLGKEWFNVVKIIYQTYHEHGIIVIDPNFPPDWRQNPCRVLNYSVPILQDSPTLSFSLLNVISLLKCKNRIPNIKPIDYFSDHCNGHNIYYPPKEDSQWPDSNQCSLIQLPFGQKSLGSTKISLSDEIYIQVHLSLSCLLDENCRVEEHQKIDSKSITIGVAIGSVGVIIIGLIVILLRNKRRYKPLGSQNQSRSVESEITHSRSNQSDITHSTAILESRNIYFGVPVFSYEELEEATNKFDQSKELGSGGFGTVYYGKLKDGREVAVKRLFERNYKRVQQFINEVKILTRLRHRNLVSLYGCTSRASHELLLVYEYISNGTLGCHLHGNLAKPGSLPWPVRMRIAVETANALSYLHACDIIHRDVKSSNLLLDSHFCIKVADFGLSRLFPKFATHVSTAPAGSPGYLDPEYHQCYQLTEKSDVYSFGVLLIELISSKPAIDVTRHKDDIKLANMAVNKIQRGAFAELVDPSLGFESDNEVKNMIISVAKLAFHCLQRDRELRPSMDEVMEFLQKIENGNHDLKHLEIHGAGFSNREIHKSLPTTVHRDGAASLNNSKPQRPPRTI 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00846 634 CDD STKc_IRAK 315 584 - -
Accr10g00846 634 SUPERFAMILY Protein kinase-like (PK-like) 290 585 IPR011009 -
Accr10g00846 634 FunFam receptor-like protein kinase FERONIA 270 385 - -
Accr10g00846 634 Pfam Protein kinase domain 310 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00846 634 FunFam Wall-associated receptor kinase-like 20 386 593 - -
Accr10g00846 634 MobiDBLite consensus disorder prediction 256 275 - -
Accr10g00846 634 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 30 605 IPR044652 GO:0004672
Accr10g00846 634 Gene3D Phosphorylase Kinase; domain 1 283 385 - -
Accr10g00846 634 MobiDBLite consensus disorder prediction 614 634 - -
Accr10g00846 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Accr10g00846 634 Gene3D Transferase(Phosphotransferase) domain 1 386 595 - -
Accr10g00846 634 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00846 634 MobiDBLite consensus disorder prediction 616 634 - -
Accr10g00846 634 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Accr10g00846 634 ProSiteProfiles Protein kinase domain profile. 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00846 Accr-Chr10 27107582 27109985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00846 67 586 Receptor kinase-like Gene Family AT1G25390 44.301 2.47e-138 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00846 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00846 - - pcin:129310591 800.045