Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00845 ATGGTTCTACCTGTTTATTTCTTTTTCTTCTTGTTTTCTAACCATGTTCTTCCTTTGTCTTCTACTTCTTCTGAAGAATGTCCATCTTCCATTTATTGTGGGAATATGGGCGAGCTCATATTCCCCTTCACCACTTCAAATCACAGCAAGTGTGGAATGTTGGCGATTCATGGTTGTGAAGACCATAATCCCAACGCAACTAAAACTGTACAATTCGGTGGAAAGAAATTTCAAGTGAGAAGTATAGATCCCTTTCCTCAAAACAGTATTTCCCTTAGAGACGCAGCTTTACAAAAAAGTTTAGATAGATATGACTGTAATGCTTTGTGCTGTAATATTACTCTTCCTCCCACCTCACCCTTGGGTTCTTTTCAAATCTTCCCACACACAACAACCTTTTACAAATGTAATATTAGCCCCAAAGTTAGCCTTCCCCAATTCTTCAACCATACAGGGTGTGGTAAGAGGAGTAATCAAACCATCTTCTTCAGGATACAAGATGATGAAGATTATCCATCATCTTCTTTAGAAGCATGTCCAAGGGTTCAGCTTCCGGTGAACACGAAGCTGGCTTCCTCAGCAGATCCATTCACATTCATAGCTTCTGAATTCTCCGTTGTCATTGAGTTTTCTTATGACTGTTTCCTATGTTATCACGACCATAAAGGCATATGCCTACTCAACAGCAAAGGAGCATTTTATTGTTCTAAATACAAAGATGATCAGGAAAAGAGACGGGTTTTGATGCTGGGATTGATCGTAGGTGGTTTTGGGATCCTGGTATTAACGTTGGTGCTCATCTTCCGACACTACAAACAGAAACAGAAACATGCCCGACTCCGATCAGCCAATCACTACCTGAATGAACAGGATCCTGACGGTGATAGGCTTTTCTTTGGAGTCCCTATCTTCTCCTACATGGAGCTTCAAGACGCAACCAACAACTTTGAACCCTCCAACAAACTTGGAGATGGTGGATTCGGCTCTGTTTACTATGGGAAGCTTCAAGATGGGCGTGAGGTTGCAGTGAAGCATCTATTCAACCACAACTACAAGCGAGTAGAACAGTTTATGACAGAAGTCGAGATTCTCACTCGCCTGCGTCACAGAAATCTTGTCTCCCTCTACGGCTGCACTTCACGTCAGAGCCGTGAGCTCCTCCTTGTCTATGAATATATCCCAAATGGAACACTGGCCAGTCACCTCCATGGCGGCAATGCAAATCCTGCATTGCTCACATGGCCTCTACGAATCAAAATCGCCATAGAAACTGCCACTGCTCTTTCTTACCTCCATGCCTCCGACATCATCCACCGTGACGTCAAAACCAACAACATTCTCCTCGATAAGAACTTTTGTGTTAAGGTGGCAGATTTTGGACTTTCTAGGCTGTTCCCGGATGATGTGTCGCATGTTTCTACGGCACCACAAGGAACACCAGGCTATCTTGATCCAGAGTATCACTATTGCTTTAGGCTAACAAACAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAAAGCCAGTGGTTGATATGACGAGGAACAAAGATGAGATTACATTGGCAAATCTAGCACTGAGGAAGATTCAGAAGAATCAATTTGAGCAGCTGGTGGATCCATGTTTGGGGATTGACAAGGATAGTGAGGTGAAGAAGAAGGTGGTTAAAGTGGGAGAATTGGCACTTCAGTGTTTGCAGATAGACAAGGAGATGAGACCTTCCATTGAAGAGGTTTTAGAGGTTTTGAGGAAAATTGAAAGTGGGAAAGAAGATAAGGAAGCAGGGGAAGACGGTCATGGTGATGGTTGTGAAATTTCAAAGAATAAAGAAGATCATATACCTAGCCAACCAGTGACTTCAAAAAAATATGATCAGGCAAAGTTGTTCAAGTCAGCATCGTCACCAACCGACATGATTGAGAAATGGAAAAATGGAGAAGTTGATATGGCAAAGTTGCGTACCGTTTGA 1986 0.426 MVLPVYFFFFLFSNHVLPLSSTSSEECPSSIYCGNMGELIFPFTTSNHSKCGMLAIHGCEDHNPNATKTVQFGGKKFQVRSIDPFPQNSISLRDAALQKSLDRYDCNALCCNITLPPTSPLGSFQIFPHTTTFYKCNISPKVSLPQFFNHTGCGKRSNQTIFFRIQDDEDYPSSSLEACPRVQLPVNTKLASSADPFTFIASEFSVVIEFSYDCFLCYHDHKGICLLNSKGAFYCSKYKDDQEKRRVLMLGLIVGGFGILVLTLVLIFRHYKQKQKHARLRSANHYLNEQDPDGDRLFFGVPIFSYMELQDATNNFEPSNKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHRNLVSLYGCTSRQSRELLLVYEYIPNGTLASHLHGGNANPALLTWPLRIKIAIETATALSYLHASDIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTNKSDVYSFGVVLMELISSKPVVDMTRNKDEITLANLALRKIQKNQFEQLVDPCLGIDKDSEVKKKVVKVGELALQCLQIDKEMRPSIEEVLEVLRKIESGKEDKEAGEDGHGDGCEISKNKEDHIPSQPVTSKKYDQAKLFKSASSPTDMIEKWKNGEVDMAKLRTV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00845 661 MobiDBLite consensus disorder prediction 595 623 - -
Accr10g00845 661 Pfam Protein tyrosine and serine/threonine kinase 319 587 IPR001245 GO:0004672|GO:0006468
Accr10g00845 661 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Accr10g00845 661 Gene3D Transferase(Phosphotransferase) domain 1 393 602 - -
Accr10g00845 661 ProSiteProfiles Protein kinase domain profile. 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00845 661 FunFam Wall-associated receptor kinase-like 20 393 601 - -
Accr10g00845 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 648 IPR044652 GO:0004672
Accr10g00845 661 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 299 392 - -
Accr10g00845 661 SMART serkin_6 316 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00845 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Accr10g00845 661 SUPERFAMILY Protein kinase-like (PK-like) 298 588 IPR011009 -
Accr10g00845 661 Gene3D Phosphorylase Kinase; domain 1 290 392 - -
Accr10g00845 661 CDD STKc_IRAK 322 591 - -
Accr10g00845 661 MobiDBLite consensus disorder prediction 595 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00845 Accr-Chr10 27103395 27105704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00845 33 648 Receptor kinase-like Gene Family AT1G25390 44.817 8.93e-161 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00845 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00845 - - gmx:100778085 592.808