Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00841 ATGGTTCTACCTGTTTATTTCTTCTTCTTCTTCTTCTTTTCCTTGTTGGCTGACCATATGCTTGTTCTATCTTCTGATTCTAGTGGGGAGTGCCCACCTTCGTTTCACTGTGGGAATCTGGGCAACCTCTCCTTCCCTTACACCACCCCACAACGCAATCACTGTGGAATGTTGCCCATTCATGGCTGTGAGGATGAACATCCCAACGGTCAAAAAACTGTGTACTTTGGGAAAGAGCAGTTTCAAGTGACAGGAGTAGGGAACATGTTCAACCCTGCAGTTTTCATTAGAGACACAGATTTACAGAAGCGTTTGGAAAAAGATGACTGTGATGTTTTGTGCTGCAATATTACTCTTCCTACAAGCTCACCCTTGGGTTACTTTGCTATCGGCCCAACTATAATAACCATGTACAAATGTAATAGCTCGCTCTATTACAACGTTTCAAGCCAATTCTTGAACTATACAGGATGTGCTAAAAGTAATCATGAGACCATCTTCTTCCGATCCCAAGATCAAGATCATCCTCCACCTTCTTTAGCAACATGTTCAAGGGTTCAGCTTCCAGTCAATATGATGACTTTCTCTCCTGATCCATTCACATTCATTGCTTCTGACTTCACCGTTAATGTCAAACTTTCTGATGACTGTATTCGGTGTTCTGACGACAATATGGGCCTATGCCGTCTTAACAGCACCGGCGGATTTTATTGTTCCAAATTCAAAGATGAAGCTGAGATAAAACATCAAAAGAAAGTACGGGCTTGGATGCTGGCATTCCGTATAGGTTTTGGGTTGGGACTAGGACTCCTGATATTAGCTTTGGTGCTCATCATCCGACTCTACAAACAGAAACAGAGTGCTCTGTCAGATGTCAGACTCCGATCAACGAACAAACAAAAACACAGGTCTTTAAAGTCCCAAAATCAGTCAAGAAGCATTGAATCTGATAATACTCACTCAAGAAGCAATGAACATCATAATACTCACTCAAATGCAATCCAAGAAAGTAGAAATATCTACTTTGGGGTACCGGTCTTCTCCTATGAGGAACTCGAAGAGGCAACAAACAAATTTGATCAATCAAGACAACTTGGGAGAGGAGGCTTTGGAACTGTTTACTATGGAAAGCTTAAAGATGGAAGAGAAGTTGCTGTCAAGCGCCTGTTTGAGCGCAACTACAGAGGTGTGCAACAATTCATAAATGAAGTTCAGATACTCACACGATTGCGCCACAGAAACCTTGTCTCACTCTATGGCTGCACTTCATGTTCCAGCCATGAGCTACTGTTGGTCTATGAGTACATTTCAAATGGAACTCTTGGTTGTCATCTTCATGGCAATCTAGCAAAACAGGGTTCACTGCCATGGTCTGTTAGGATGAGGATTGCCACAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGCGGCGTCATTCACCGCGATGTGAAATCCAGCAACCTTCTTCTTGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCAAGGTTGTTTCCCAAGCTGGTGTCTCATGTCTCCACATGTCCAGCAGGAAGCCCAGGTTATTTGGACCCAGAATATTACCAATTCTGTCAGCTTACTGAAAAGAGTGATGTTTATAGCTTTGGGGTCGTCCTCATTGAGCTGATATCATCTAAGCCAGCTATCTTTATGAGGGCCACCGATAAGATTAATTTGGCAAATATGGCAGTTAAGAAGATTCAGAGAAGTGCGTTTAGTGAGCTAGTAGATCCTTCCCTTGGTTTTGAGTCAGATGACAAGGTTAGGGAGATGATAATGTCAGTGGCTAAGTTAGCTTTTCGGTGCGTACAGAGGGATGTGGAGCTAAGGCCTTCCATGGGTGAAGTAATGGAGTTTCTGCAGAAAATTGAAAATGGGAATTATGATATTAAGCATCTAGAGTTTCTTGGTGCTGGGTTTCTAAACAGGGAGATTTATACATTTCTTCCAACCTCAATACATAGGGATGAAGATGCATCATTGAACAACTCGGAGCTACAACACCCTCCCCCTACAGTATGA 2052 0.4259 MVLPVYFFFFFFFSLLADHMLVLSSDSSGECPPSFHCGNLGNLSFPYTTPQRNHCGMLPIHGCEDEHPNGQKTVYFGKEQFQVTGVGNMFNPAVFIRDTDLQKRLEKDDCDVLCCNITLPTSSPLGYFAIGPTIITMYKCNSSLYYNVSSQFLNYTGCAKSNHETIFFRSQDQDHPPPSLATCSRVQLPVNMMTFSPDPFTFIASDFTVNVKLSDDCIRCSDDNMGLCRLNSTGGFYCSKFKDEAEIKHQKKVRAWMLAFRIGFGLGLGLLILALVLIIRLYKQKQSALSDVRLRSTNKQKHRSLKSQNQSRSIESDNTHSRSNEHHNTHSNAIQESRNIYFGVPVFSYEELEEATNKFDQSRQLGRGGFGTVYYGKLKDGREVAVKRLFERNYRGVQQFINEVQILTRLRHRNLVSLYGCTSCSSHELLLVYEYISNGTLGCHLHGNLAKQGSLPWSVRMRIATETANALSYLHACGVIHRDVKSSNLLLDHHFCVKVADFGISRLFPKLVSHVSTCPAGSPGYLDPEYYQFCQLTEKSDVYSFGVVLIELISSKPAIFMRATDKINLANMAVKKIQRSAFSELVDPSLGFESDDKVREMIMSVAKLAFRCVQRDVELRPSMGEVMEFLQKIENGNYDIKHLEFLGAGFLNREIYTFLPTSIHRDEDASLNNSELQHPPPTV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00841 683 SUPERFAMILY Protein kinase-like (PK-like) 340 635 IPR011009 -
Accr10g00841 683 Gene3D Transferase(Phosphotransferase) domain 1 436 642 - -
Accr10g00841 683 Gene3D Phosphorylase Kinase; domain 1 329 435 - -
Accr10g00841 683 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 665 IPR044652 GO:0004672
Accr10g00841 683 SMART serkin_6 359 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00841 683 FunFam receptor-like protein kinase FERONIA 318 435 - -
Accr10g00841 683 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Accr10g00841 683 MobiDBLite consensus disorder prediction 293 330 - -
Accr10g00841 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Accr10g00841 683 Pfam Protein kinase domain 360 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00841 683 ProSiteProfiles Protein kinase domain profile. 359 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00841 683 CDD STKc_IRAK 365 633 - -
Accr10g00841 683 FunFam Wall-associated receptor kinase-like 20 436 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00841 Accr-Chr10 26868478 26871015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00841 35 635 Receptor kinase-like Gene Family AT1G25390 39.835 2.77e-132 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00841 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00841 - - pcin:129310591 626.706