Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00840 ATGGTTCTACCTGTTTATTTCTTCTTCTTCTTCTTCTTTTCCTTGTTGGCTGACCATATGCTTGTTCTATCTTCTGATTCTAGTGGGGAGTGCCCACCTTCGTTTCACTGTGGGAATCTGGGCAACCTCTCCTTCCCTTACACCACCCCACAACGCAATCACTGTGGAATGTTGCCCATTCATGGCTGTGAGGATGAACATCCCAACGGTCAAAAAACTGTGTACTTTGGGAAAGAGCAGTTTCAAGTGACAGGAGTAGGGAACATGTTCAACCCTGCAGTTTTCATTAGAGACACAGATTTACAGAAGCGTTTGGAAAAAGATGACTGTGATGTTTTGTGCTGCAATATTACTCTTCCTACAAGCTCACCCTTGGGTTACTTTGCTATCGGCCCAACTATAATAACCATGTACAAATGTAATAGCTCGCTCTATTACAACGTTTCAAGCCAATTCTTGAACTATACAGGATGTGCTAAAAGTAATCATGAGACCATCTTCTTCCGATCCCAAGATCAAGATCATCCTCCACCTTCTTTAGCAACATGTTCAAGGGTTCAGCTTCCAGTCAATATGATGACTTTCTCTCCTGATCCATTCACATTCATTGCTTCTGACTTCACCGTTAATGTCAAACTTTCTGATGACTGTATTCGGTGTTCTGACGACAATATGGGCCTATGCCGTCTTAACAGCACCGGCGGATTTTATTGTTCCAAATTCAAAGCAAAAGATGAAGCTGAGATAAAACATCAAAAGAAAGTACGGGCTTGGATGCTGGCATTCCGTATAGGTTTTGGGTTGGGACTAGGACTCCTGATATTAGCTTTGGTGCTCATCATCCGACTCTACAAACAGAAACAGAGTGCTCTGTCAGATGTCAGACTCCGATCAACGAACAAACAAAAACACAGGTCTTTAAAGTCCCAAAATCAGTCAAGAAGCATTGAATCTGATAATACTCACTCAAGAAGCAATGAACATCATAATACTCACTCAAATGCAATCCAAGAAAGTAGAAATATCTACTTTGGGGTACCGGTCTTCTCCTATGAGGAACTCGAAGAGGCAACAAACAAATTTGATCAATCAAGACAACTTGGGAGAGGAGGCTTTGGAACTGTTTACTATGGAAAGCTTAAAGATGGAAGAGAAGTTGCTGTCAAGCGCCTGTTTGAGCGCAACTACAGAGGTGTGCAACAATTCATAAATGAAGTTCAGATACTCACACGATTGCGCCACAGAAACCTTGTCTCACTCTATGGCTGCACTTCATGTTCCAGCCATGAGCTACTGTTGGTCTATGAGTACATTTCAAATGGAACTCTTGGTTGTCATCTTCATGGCAATCTAGCAAAACAGGGTTCACTGCCATGGTCTGTTAGGATGAGGATTGCCACAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGCGGCGTCATTCACCGCGATGTGAAATCCAGCAACCTTCTTCTTGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCAAGGTTGTTTCCCAAGCTGGTGTCTCATGTCTCCACATGTCCAGCAGGAAGCCCAGGTTATTTGGACCCAGAATATTACCAATTCTGTCAGCTTACTGAAAAGAGTGATGTTTATAGCTTTGGGGTCGTCCTCATTGAGCTGATATCATCTAAGCCAGCTATCTTTATGAGGGCCACCGATAAGATTAATTTGGCAAATATGGCAGTTAAGAAGATTCAGAGAAGTGCGTTTAGTGAGCTAGTAGATCCTTCCCTTGGTTTTGAGTCAGATGACAAGGTTAGGGAGATGATAATGTCAGTGGCTAAGTTAGCTTTTCGGTGCGTACAGAGGGATGTGGAGCTAAGGCCTTCCATGGGTGAAGTAATGGAGTTTCTGCAGAAAATTGAAAATGGGAATTATGATATTAAGCATCTAGAGTTTCTTGGTGCTGGGTTTCTAAACAGGGAGATTTATACATTTCTTCCAACCTCAATACATAGGGATGAAGATGCATCATTGAACAACTCGGAGCTACAACACCCTCCCCCTACAGTATGA 2058 0.4257 MVLPVYFFFFFFFSLLADHMLVLSSDSSGECPPSFHCGNLGNLSFPYTTPQRNHCGMLPIHGCEDEHPNGQKTVYFGKEQFQVTGVGNMFNPAVFIRDTDLQKRLEKDDCDVLCCNITLPTSSPLGYFAIGPTIITMYKCNSSLYYNVSSQFLNYTGCAKSNHETIFFRSQDQDHPPPSLATCSRVQLPVNMMTFSPDPFTFIASDFTVNVKLSDDCIRCSDDNMGLCRLNSTGGFYCSKFKAKDEAEIKHQKKVRAWMLAFRIGFGLGLGLLILALVLIIRLYKQKQSALSDVRLRSTNKQKHRSLKSQNQSRSIESDNTHSRSNEHHNTHSNAIQESRNIYFGVPVFSYEELEEATNKFDQSRQLGRGGFGTVYYGKLKDGREVAVKRLFERNYRGVQQFINEVQILTRLRHRNLVSLYGCTSCSSHELLLVYEYISNGTLGCHLHGNLAKQGSLPWSVRMRIATETANALSYLHACGVIHRDVKSSNLLLDHHFCVKVADFGISRLFPKLVSHVSTCPAGSPGYLDPEYYQFCQLTEKSDVYSFGVVLIELISSKPAIFMRATDKINLANMAVKKIQRSAFSELVDPSLGFESDDKVREMIMSVAKLAFRCVQRDVELRPSMGEVMEFLQKIENGNYDIKHLEFLGAGFLNREIYTFLPTSIHRDEDASLNNSELQHPPPTV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00840 685 Pfam Protein kinase domain 362 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00840 685 MobiDBLite consensus disorder prediction 295 332 - -
Accr10g00840 685 CDD STKc_IRAK 367 635 - -
Accr10g00840 685 FunFam Wall-associated receptor kinase-like 20 438 644 - -
Accr10g00840 685 SUPERFAMILY Protein kinase-like (PK-like) 342 637 IPR011009 -
Accr10g00840 685 Gene3D Phosphorylase Kinase; domain 1 331 437 - -
Accr10g00840 685 SMART serkin_6 361 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00840 685 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 667 IPR044652 GO:0004672
Accr10g00840 685 Gene3D Transferase(Phosphotransferase) domain 1 438 644 - -
Accr10g00840 685 FunFam receptor-like protein kinase FERONIA 320 437 - -
Accr10g00840 685 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Accr10g00840 685 ProSiteProfiles Protein kinase domain profile. 361 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00840 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00840 Accr-Chr10 26868478 26871015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00840 35 637 Receptor kinase-like Gene Family AT1G25390 39.769 1.82e-131 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00840 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00840 - - pcin:129310591 625.935