Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00832 ATGGCTCTACCTGTTTATTTGTTCTTCTTCTTCTTGTCCTTGTTGGCTGATGTCCAGATGCTTGTTCTATCTTCTGATTCTGGCGGAGAGTGCCCACCTTCGTTTCACTGTGGGAATCTGGGCAACCTCTCGTTCCCTTACACCACTCCACAACGCAATCACTGTGGAATGTTGCCCATTCATGGCTGTGAAGATGAACACCCCAACGCTAACAAAACTGTCTACTTTGGGAAAAAGCAGTTCCCAGTGACACGAGTAGGATACATATTCAACCATGTAGTTTTCGTTAGAGACACAGATTTACAAAAGCGTTTGGAAAAAGATGACTGTGATGCTTTGTGCTGCAATATTACTCTTCCTATTACTCTTCCTACAAGCTCACCCTTGGGTCGCTTTGATAGCTTCCCAAACAAAATAACCATGTACAAATGTAATAGCTCGCGCAATTACAACGTTTCAAAGCAATTCTTGAAGTATACAGGATGTGCTAACAGTAATCATGAGACCATCTTCTTCCGATCTCAAGATCAAGATCATCCTCCACCTTCTTTAGCAACATGTTCAAGGGTTCAGCTTCCAGTCAATGTGATGGCTTTCTCTCCTAATCCATTCACATTCATTGCTTCCGACTTTGCCGTTAACATCAAACTTTCTGATGCCTGTTTTCGGTGTTCTTTCTTCAATAAAGGCATATGCCGCCTCAACAGCACCGGTGGATTTTATTGTTCCAAATTCAAAGATGCAGCAGAGATAAAATTTCAAAAGAAAATACGGGCCTGGGCGCTGGGATTGCGTATAGGTTTTGGGGTGGGGCTAGGACTTCTGATATTAGCATTGGTGCTCATCATCCGAATCTACAAACAGAAACATAGTGCTCTGTCACATGTCAGACTCCGATCAACGAATCACTACCCAAACAATGAACCAGACCCAGACAGCGGCAGACTCTTCTTTGGAGTCCCCATCTTCTCTTACAACGAACTTCAAGATGCAACCGACAACTTTCACCCCTCCAACAAACTCGGGGACGGCGGCTTTGGCTGTGTTTACTATGGGAAGCTTCAGGATGGGCGTGAAGTTGCAATAAAACATCTATTCAACCACAACTACAAGAGAGTAGAACAGTTCATGACAGAAGTTGAGATCCTCACTCGCCTCCGTCACAAAAACCTTGTCTCCCTCTACGGCTGCACTTCACGTCAGAGCCGTGAGCTCCTCCTTGTCTATGAATACATCCCAAACGGAACCCTCGCCAGCCACCTCCGCGGCGGCTCTGCAAATCCTTCATTACTCACATGGCCTCTTCGAATCAAAATCGCCATAGAAACAGCAAGTGCTCTCTCTTACCTTCATGCCTCCGGGATCATCCACCGTGACGTCAAAACCAACAACATTCTCCTGGACAACAATTTTTGTGTCAGGGTTGCGGATTTCGGACTTTCTAGGTTGTTCCCGGACGATGTGTCGCATGTTTCTACGGCTCCACAAGGAACACCGGGTTATCTTGATCCAGAGTATTACTTTTGCTTCAGGCTGACCAATAAGAGCGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCGGCCGTTGATATGGGAAGGAATAAAGATGAGATTACCCTGGGAAGTCTTGCGGTGAGGAAGATTCAGAAGAATAAATTTGAGGAACTGGTTGATCCATGTTTGGGGATAGAGAAGGATAGTGAGGTGAAGAAGAAAGTGGTTGCTTTGGGGGAATTGGCGTTTCAGTGTCTGCAGATAGAAAAGGAGATGAGGCCTTCCATTGATGAGGTGTTAGAGATTTTGAGGGAAATTGAGAGTGGGAAAGAAGAAGGCGGAGACAGAGAGGAATTGAGCGAAGCTACGGTGAAAAGTTCAATAAGCTATACTCAGGCAAAATTGTTCAAGTCATCGCCTTCACCAAATACTGTTACTGTAAAATGGAGCAGTGAATGTCCTCCTAATTGCAGCGTCTAA 1992 0.4508 MALPVYLFFFFLSLLADVQMLVLSSDSGGECPPSFHCGNLGNLSFPYTTPQRNHCGMLPIHGCEDEHPNANKTVYFGKKQFPVTRVGYIFNHVVFVRDTDLQKRLEKDDCDALCCNITLPITLPTSSPLGRFDSFPNKITMYKCNSSRNYNVSKQFLKYTGCANSNHETIFFRSQDQDHPPPSLATCSRVQLPVNVMAFSPNPFTFIASDFAVNIKLSDACFRCSFFNKGICRLNSTGGFYCSKFKDAAEIKFQKKIRAWALGLRIGFGVGLGLLILALVLIIRIYKQKHSALSHVRLRSTNHYPNNEPDPDSGRLFFGVPIFSYNELQDATDNFHPSNKLGDGGFGCVYYGKLQDGREVAIKHLFNHNYKRVEQFMTEVEILTRLRHKNLVSLYGCTSRQSRELLLVYEYIPNGTLASHLRGGSANPSLLTWPLRIKIAIETASALSYLHASGIIHRDVKTNNILLDNNFCVRVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYYFCFRLTNKSDVYSFGVVLMELISSMPAVDMGRNKDEITLGSLAVRKIQKNKFEELVDPCLGIEKDSEVKKKVVALGELAFQCLQIEKEMRPSIDEVLEILREIESGKEEGGDREELSEATVKSSISYTQAKLFKSSPSPNTVTVKWSSECPPNCSV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00832 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Accr10g00832 663 CDD STKc_IRAK 341 610 - -
Accr10g00832 663 Gene3D Transferase(Phosphotransferase) domain 1 412 621 - -
Accr10g00832 663 Gene3D Phosphorylase Kinase; domain 1 312 411 - -
Accr10g00832 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 654 IPR044652 GO:0004672
Accr10g00832 663 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00832 663 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00832 663 Pfam Protein tyrosine and serine/threonine kinase 338 606 IPR001245 GO:0004672|GO:0006468
Accr10g00832 663 FunFam Wall-associated receptor kinase-like 20 412 619 - -
Accr10g00832 663 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Accr10g00832 663 SUPERFAMILY Protein kinase-like (PK-like) 312 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00832 Accr-Chr10 26386754 26389101 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00832 140 663 Receptor kinase-like Gene Family AT1G25390 47.584 1.49e-151 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00832 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00832 - - aprc:113871894 588.186