Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00829 ATGATTCAAACCCACCTCTTTTCATCATCTTTCTTCTTCTTCTTCTTCGTTTTCCTTTATTCCCTCACCAGATTCATCACCCTCTGTTCATCTGTGAACCCGAACTTCGAAGCTTGTAACCACACAATCTGTGGTAACCAAACCATAAAATACCCTTTTTACATCGAAGGCCGACAGAGATCTTTCTGTGGTTACCCAGGTTTTGGCCTTGTTTGTTCCGATAATGGCTTCCCAATCATTAATATCTCCAATTATCAATACGTCATCCATGAAATTTCTTATCCCACCCAATCAACTCGAGTGTCTGAAGCTGTTTTCTCTCCACCAAACGCCATATCATCATCATCATCCTGTGCGATTCCTCGTATTCACAACATGACCTTGGATGGAACAAGATTCAGTTTTGCTTCGAACCAGAGTGACCTATTCTTGTTATTTGGATGCAATATGGGGTTGTTGCCGAGGAATTTTCGGAAGTACAGAGTTGGGTGTTCTGCAGAAAACGAAACGATTTCAGTTCTGGGTATGACGGAGGACGGCGGAGATTTAAGGTATGCGTCGGAGAAGTGTAATGGTAGCATGGTGGTGAAGACTAAGATTGGAAATGAGACGAAAGGAGGAGAAATTAATGGAGATGTGGTGAGAAGAGGGATTTTGTTGAATTGGGTTGTGGCGAATTGCAGTTGGTGTGAGGAGACCGGAGGGAAGTGTGGGTTCGATACAAACCAAACTGCTTACAGCTTCAAATGCTATTGCCCAGATAGAGATCATGCTCTGAGATGTGATCCTCCTGTTCCTGCTTCTGCTGCAGGGGATAGGAGCAGGGTTCTGAAGCTGGGACTAGGATTAGGATTAGGTATTGGGCTTCTAGCCATTCTGATGATTGCGTGGCTCATAAGACGATGGTGTTACCTGCGAAAACATGGTTCTTATGATGATGATGATCAATTCGAACCCAGAAACTCTTATTCTGCTGACTGCTCAATTTCCGACCCAGAAAATGGCAATATCTACCTAGGTGTTCCTCTGTTCTCTTACAAACAGCTTCAGGAAGCAACAAACAACTTCGACCAAGCCAGAGTACTTGGAGATGGTGGCTTTGGAATTGTTTACTATGGTAAACTTAGCGATGGACGAGAAATTGCTGTAAAACGCCTGTTCGAGCACAATTACAGAAGAGTAGAACAGTTCAGGAATGAAGTGAAGATACTCGCAAGACTACGCCACAAAAATCTTGTGTCTTTATATGGCTGCACTTCACGCAGAAGCCAAGATCTCCTTCTGGTTTATGAATACATCTCAAATGGCACAGTTGCTAGTCACCTCCAAGGTAACAGTAACTCTTTATCAACATCTACGCCACTACCATGGCCTATTCGTCTCAAAATCGCCATAGAAACTGCGAGTGCATTGGTCTACCTCCATGCTTCAGACATCATCCATCGCGATGTAAAGACTAACAACATCCTCGTAGATAACAATTTTAACGTTAAAGTTGCTGACTTTGGACTCTCTAGATTGTTTCCCAATGATGCGTCACATGTCTCCACAGCACCACAAGGAACACCAGGTTATGTGGACCCAGAATACTACCAATACTACCAGCTTACGAGTAAGAGTGATGTATATAGCTTTGGGGTTGTGTTGATCGAGCTCATATCTTCGAAGCCTGCGGTGGATATAAGTAGGAGTAAGGATGAAGTGAACTTGTCGAGCTTGGCGATGAAGAAGATTCAAGAGAGTGCGTTTATGGAACTGGTGGATCCGTGTCTGGGGATTGAGAAGGATGGTGAAGTGAAGAGGATGGTGGTTTCCGTTGGGGAATTGGCGTTTCAATGTTTGCAAAGAGATAAGGATTTGAGGCCTTCCATGGAAGATGTTTTGGAAGCTCTGAAGAAGATTCAGAGTGGTGCAGGTGATGAAGAGGTTGAGAATCTTGAAGGTAGTGATAAGCCACCGCCATCATCCCCAACGTCAATTTCGCCGGAGAAGGAGGACGTTGGTTTGTTGAAGAAGGTGAATCCACCTCCTTCTTCGCCCAATACCGTAATTGATAAATGGACGAGTGAATCTTCCACCCCTAATGCGAGTGGTTGA 2097 0.4421 MIQTHLFSSSFFFFFFVFLYSLTRFITLCSSVNPNFEACNHTICGNQTIKYPFYIEGRQRSFCGYPGFGLVCSDNGFPIINISNYQYVIHEISYPTQSTRVSEAVFSPPNAISSSSSCAIPRIHNMTLDGTRFSFASNQSDLFLLFGCNMGLLPRNFRKYRVGCSAENETISVLGMTEDGGDLRYASEKCNGSMVVKTKIGNETKGGEINGDVVRRGILLNWVVANCSWCEETGGKCGFDTNQTAYSFKCYCPDRDHALRCDPPVPASAAGDRSRVLKLGLGLGLGIGLLAILMIAWLIRRWCYLRKHGSYDDDDQFEPRNSYSADCSISDPENGNIYLGVPLFSYKQLQEATNNFDQARVLGDGGFGIVYYGKLSDGREIAVKRLFEHNYRRVEQFRNEVKILARLRHKNLVSLYGCTSRRSQDLLLVYEYISNGTVASHLQGNSNSLSTSTPLPWPIRLKIAIETASALVYLHASDIIHRDVKTNNILVDNNFNVKVADFGLSRLFPNDASHVSTAPQGTPGYVDPEYYQYYQLTSKSDVYSFGVVLIELISSKPAVDISRSKDEVNLSSLAMKKIQESAFMELVDPCLGIEKDGEVKRMVVSVGELAFQCLQRDKDLRPSMEDVLEALKKIQSGAGDEEVENLEGSDKPPPSSPTSISPEKEDVGLLKKVNPPPSSPNTVIDKWTSESSTPNASG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00829 698 Gene3D Phosphorylase Kinase; domain 1 330 432 - -
Accr10g00829 698 SMART serkin_6 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00829 698 FunFam receptor-like protein kinase FERONIA 322 432 - -
Accr10g00829 698 CDD STKc_IRAK 362 634 - -
Accr10g00829 698 Pfam Wall-associated receptor kinase C-terminal 183 254 IPR032872 -
Accr10g00829 698 Pfam Protein kinase domain 357 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00829 698 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Accr10g00829 698 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00829 698 Gene3D Transferase(Phosphotransferase) domain 1 433 650 - -
Accr10g00829 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Accr10g00829 698 MobiDBLite consensus disorder prediction 675 698 - -
Accr10g00829 698 Pfam Wall-associated receptor kinase galacturonan-binding 39 102 IPR025287 GO:0030247
Accr10g00829 698 MobiDBLite consensus disorder prediction 636 698 - -
Accr10g00829 698 FunFam Wall-associated receptor kinase-like 20 433 644 - -
Accr10g00829 698 SUPERFAMILY Protein kinase-like (PK-like) 341 648 IPR011009 -
Accr10g00829 698 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 691 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00829 Accr-Chr10 26234383 26243967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00829 225 698 Receptor kinase-like Gene Family AT1G25390 53.320 1.72e-158 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00829 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00829 - - aip:107643858 716.842