LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g00823	ATGCTTCCTTTGGTCTTCTTGTTTCTTCTCCTTCTCTGTAATCATCTTTCAGCTGTGATTTCTCTAAATGGTGAAGGCTATGTCCTTTTGGCTCTTAAACAGTCCATTACAGACCCAGAAGGGTCTATGAGTAACTGGAATTCTTCTGATGAAAACCCATGTTCGTGGAACGGTGTTATATGCAAGGAACAAAGAGTTATTTCTTTAAGTATCCCAAAGAGGAAGCTTTACGGCTCGCTTCCTTCTTCTCTTGGATCTCTTATTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTGCCTCCTGAGCTATTCCTAGCACAGGGGCTTCAAAGTTTAGTCCTTTATGGCAATTCCTTTTCTGGGCATGTTCCACAAGAGATTGGGAAGCTTAGGTACCTTCAAACCTTAGATTTATCTCAAAATTTCTTCAATGGGTCTTTACCTGCTTCAATTGTCCAATGCAAGAGACTCAGAACCCTTGTTCTGAATCACAACAATTTGACTGGTCCTCTTCCGGATCGATTTGGTGCTGATTTGTTCTCTCTGGAAATACTTGACCTTGCTTTCAATCACTTCAATGGCTCAATTCCTAGTGATATGGGGAATCTATCTAGCCTACAAGGAACTGTAGATTTATCTCATAATAGTTTTTCTGGCTCAATCCCACCCAGCCTTGGTAATTTGCCTGAGAAGGTTTACATTGATCTTACTTTCAACAATTTGAGTGGTCCTATACCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCTTTTATAGGCAACTCTGGTCTTTGTGGACCTCCTTTGAAAAAGCCTTGTTCTTCAGAAACTTCCGGTGCTAGTTCGCCTTCCTCATTTCCATTTCTGCCAGATAACTACCCACCTGGGGATTCTAATAATCCTTATGGGAGAAATGAGAAAACCAAAGGGTTAAGTAAGGGAGCTATTATAGGCATTGTTGTGGGTGATATAGTTGGAATTTGTCTCTTGGGTTTGCTGTTCTCTTACTGCTACTCAAGGGTTTGTGGGTTTAATCTGGATAATGAGGATGAAGCTGGTTTTGAGAAGGGAGAGAAAGGAAGGAGGAAAGAGTGTTTTTGCTTCAGAAAGGATGAATCTGAGACCTTATCGGATAATGTTGAGCAATATGATCTTGTTCCCTTAGATCCTCAAGTGGCATTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTTTGGGTAAGAGTGGAATAGGCATTGTCTACAAGGTGGTGCTTGAAGATGGGCTTACCTTAGCCGTGAGAAGATTAGGCGAAGGCGGTTCTCAAAGGTTTAAAGAATTCCAAACAGAAGTTGAAGCAATAGGAAGATTAAGGCATCCTAACATTGTTACCCTTAGAGCTTATTACTGGTCTGTTGACGAGAAACTTCTCATCTATGATTATATACCCAATGGAAATCTTGCTACAGCAATTCATGGTAAGGCTGGAATAGTTGCATTCACACCAATTTGTTGGTCAGTTCGGCTGCAAATCATGAAAGGAATCGCGAAAGGATTGGTCTATTTGCATGAGTTTAGCCCCAAAAAGTATGTTCATGGAGACCTGAAACCAAGTAACATACTGCTTGGGAATAACATGGAACCCCACATTTCTGATTTCGGACTTGGAAGACTTGCAAATATTGCTGGAGGGTCTCCAACCTTGCAATCCAACAGAGTCGCTGCTGAGAAACCTCATGAGAGACAAAAGAGCTTTTCTGCATCAGAAGTCTCAGCTAATATTTTGGGAACCGGCTACCAGGCTCCGGAAGCATTGAAAGTGGTGAAGCCATCGCAGAAATGGGACGTCTATTCATATGGTGTGATTTTGATAGAAATGATCACAGGAAGGTTGCCCATTGTCCATGTGGGAAACTCGGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGATAAGAAGCCACTCTCAGATGTAATAGACCCATATCTCCCGGAAGAAGACGTGGATAAGGAAGAGGAGATCATCGCGGTTTTGAAGATCGCAATGGCTTGTGTCCACAGCAGCCCTGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCTGCTTCTTCTGATTGA	2142	0.423	MLPLVFLFLLLLCNHLSAVISLNGEGYVLLALKQSITDPEGSMSNWNSSDENPCSWNGVICKEQRVISLSIPKRKLYGSLPSSLGSLIQLRHVNFRNNKLFGKLPPELFLAQGLQSLVLYGNSFSGHVPQEIGKLRYLQTLDLSQNFFNGSLPASIVQCKRLRTLVLNHNNLTGPLPDRFGADLFSLEILDLAFNHFNGSIPSDMGNLSSLQGTVDLSHNSFSGSIPPSLGNLPEKVYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKKPCSSETSGASSPSSFPFLPDNYPPGDSNNPYGRNEKTKGLSKGAIIGIVVGDIVGICLLGLLFSYCYSRVCGFNLDNEDEAGFEKGEKGRRKECFCFRKDESETLSDNVEQYDLVPLDPQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGIVAFTPICWSVRLQIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGNNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSANILGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGNSEMDLVQWIQFCIEDKKPLSDVIDPYLPEEDVDKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSASSD	713

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g00823	713	Pfam	Leucine rich repeat N-terminal domain	23	61	IPR013210	-
	Accr10g00823	713	Pfam	Leucine rich repeat	113	172	IPR001611	GO:0005515
	Accr10g00823	713	Gene3D	Transferase(Phosphotransferase) domain 1	483	713	-	-
	Accr10g00823	713	ProSiteProfiles	Protein kinase domain profile.	407	708	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g00823	713	SUPERFAMILY	L domain-like	24	276	-	-
	Accr10g00823	713	Gene3D	Phosphorylase Kinase; domain 1	376	482	-	-
	Accr10g00823	713	CDD	STKc_IRAK	413	708	-	-
	Accr10g00823	713	PANTHER	OS05G0588300 PROTEIN	131	708	-	-
	Accr10g00823	713	FunFam	Leucine-rich repeat protein kinase family protein	483	711	-	-
	Accr10g00823	713	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	531	543	IPR008271	GO:0004672\|GO:0006468
	Accr10g00823	713	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	22	182	-	-
	Accr10g00823	713	FunFam	Leucine-rich repeat receptor-like protein kinase	390	482	-	-
	Accr10g00823	713	FunFam	Leucine-rich repeat receptor-like protein kinase	186	281	-	-
	Accr10g00823	713	Pfam	Protein kinase domain	413	703	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g00823	713	SUPERFAMILY	Protein kinase-like (PK-like)	412	705	IPR011009	-
	Accr10g00823	713	Gene3D	Ribonuclease Inhibitor	16	73	IPR032675	-
	Accr10g00823	713	Gene3D	Ribonuclease Inhibitor	74	282	IPR032675	-
	Accr10g00823	713	SMART	serkin_6	412	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g00823	713	MobiDBLite	consensus disorder prediction	281	311	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g00823	Accr-Chr10	26095231	26097537	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g00823	1	713	Receptor kinase-like Gene Family	AT2G01210	68.698	0.0	1001

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Accr10g00823		Pkinase	2.8e-34	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g00823	-		-	qsa:O6P43_025753	1113.98