Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00819 ATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTTGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGTGAGTCAATATGACCTTTGCTGGTATTTGGAGCTATTAAAATGA 135 0.3704 MVWRFLITFADVLELWPFTLDEFLQAFHDYVSQYDLCWYLELLK 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00819 44 ProSiteProfiles DDT domain profile. 1 44 IPR018501 -
Accr10g00819 44 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 32 IPR044977 GO:0006357
Accr10g00819 44 Pfam DDT domain 1 30 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00819 Accr-Chr10 26021321 26021781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00819 1 33 Homeobox Transcription Factor Family AT1G28420 81.818 9.68e-17 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Accr10g00819 DDT 1.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00819 - - qsa:O6P43_031877 68.9366