Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00817 ATGGAGGTTCCCTCCGCCGCCCCACCCCTCTCCTCCGCCCCACCCTCTCATCCCAACTATCCCGACTCCGTAGACTCCTCTCCTCGCTCCCGGAACACTGATTCCTTGGATGAATCTGTCCCTTCGGCCGCCGCTGCCGCCGCTTCCGCCAAGCTTCGCTTTATGTGCAGCTTCGGCGGCCACATCATCCCTCGTCCCCACGATAAGTCCCTCTGTTACGTCGGTGGAGAAACGCGTATTGTTGTCGTTGAACGCCACACCTCTCTCTCTGACCTTTCCTCTCGTCTCTCTAAAACCTTCCTCAACGGCCGTCCTTTCACTCTCAAATACTTGCTTCCCACTGAAGACCTCGATTCTCTAATTTCTGTTACCACCGATGAAGACCTCGATAACATGATCGACGAGTACGATCGAATTTCTACTTCGTCAGTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCCCGGTGAAACCCGATTTGACGCAGTCGATTCCCGTAATTAATAGCTCGGCGAAGACAGAGGATTGGTTTCTCGGTATGCTCAATAGAGGGTTTTCGGATTCTGGTTCCGTTAATTTGTTGATGGGTTTTGATGATGAGGTTGGTGCTGGCAATCTGGATGGGGGTTCGAAAGATATCGAGGCTCTGGGTTCTGGATCTTTTGGAAATGGCAAGAGTGTGAAGCAGCAGGGCCAGGATGTTCACTCTGTGCCCGATTCGCCTATGCTGGAAACCACATCTTCATTTGGGTCCACTTCTTCATCGCCTTCAATGGCGAATTTGCCGCCAATTCGGGTTCATGTTGATGATGGTAGTGGTGGTGGAGCGAGGGTGCAGGATCAGAAGGCGGTGGGAATTGAGGATCAGCTTGCTCAAATGGGTATTGGTGGCGGACAGAAGCAGGATGAGGGTTTTCTGATGTCTTCGCCTCCTACTATGCCGGCATCCACCATCCCGGCTGTGACCGGTGTGCCTATTGGCTCCTCGGTCCTTACCGGCGAATACCAGAATCGGGTTGTCTCTGATGATGAGAGATCAGACCATGGAGTCCCTGGGGGTTTTAGGAAACCTCCGACACCGCAGCCACAGGCGGTGCCTCAGCCTCAGATTGTGCATACGCAATTGCAGCAGAAGCCAACTGGAGGTGCTGATTTGCCTTCTCCAGATTCAGTTTCAAGTGACAGTAGTATGACAAATGCAATGTTGCGCCCAAAACCTATGGTCTATCAAGACCAAGCCCAGCTCCAAATTCCCTCTGGAGCTACTACAAGGGTTCCTAGTAATCCAGTTGATCCGAAACTTACAATGTCTGATTCTCATGGACGGATCCAAATGCAGCAACAAGTATTGGAACAGGGATATGTTTTGCAACAACAATTCGATCAACAGCAACAGCAACAGCAACAACCACCTCAGCAGCAGCACCAATTTATACATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTGTTGCAGCCTCAATTTGAACAACAGCAACAGCAGCAACCACCTCAGCAGCAGCACCAATTTATACATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTGTTGCAGCCTCAATTCGAACAACAACAGCAACAATTTATACATGGCACACGTTTCATTCACCATGCTCCTTCTGGGGCCGCACCACTCCCTACATTCTACCCTATGTATCCTTCTCAGCAGCAGTTTCATCCCCAGCATCATCATCAGCTTGAACAGCAATATCAGATTTACTATGTTCCCACCCGACAGACCCAACCTTACAACTTGTCTGCACAGCAACCTAATGTCAGCGAAGCTGCTACAGCAATTTCTTCTAGCCATGCCCAAACTACATCAAACCCTACAATGGTTCCGCCATCTGCGGCCTACAATGCCATGAGAAATGCTCCAGTGCCAAAATCTGAAATGACCGCAGGTGCATATAGAACGGCAATTTCCGTCACCCCTCAAGTGGTTCAAGTTGCTTCTGATCAGAATCAGCAGCAATTTGTTGCCTATTCCCAGTATCATCCATCTCAGGCTGCTGCCGCCAATTCTGCTGCCCCGGCTGGTTATGCTTTTGAGTATGCCGATCCTGCTCACACCCAGATATACTTCTCTCAGCCTCTGGCACCCACAATGCCTTCGCAATACCAAACTATGACGGGTGCAGCTGTACATCCAGAAGTTTCTGCCCAGCCTCCCTCAGACAGCATGAAGCAGCATATAAGAACATCACAGCCACAGTAA 2244 0.5022 MEVPSAAPPLSSAPPSHPNYPDSVDSSPRSRNTDSLDESVPSAAAAAASAKLRFMCSFGGHIIPRPHDKSLCYVGGETRIVVVERHTSLSDLSSRLSKTFLNGRPFTLKYLLPTEDLDSLISVTTDEDLDNMIDEYDRISTSSVKPSRIRLFLFPVKPDLTQSIPVINSSAKTEDWFLGMLNRGFSDSGSVNLLMGFDDEVGAGNLDGGSKDIEALGSGSFGNGKSVKQQGQDVHSVPDSPMLETTSSFGSTSSSPSMANLPPIRVHVDDGSGGGARVQDQKAVGIEDQLAQMGIGGGQKQDEGFLMSSPPTMPASTIPAVTGVPIGSSVLTGEYQNRVVSDDERSDHGVPGGFRKPPTPQPQAVPQPQIVHTQLQQKPTGGADLPSPDSVSSDSSMTNAMLRPKPMVYQDQAQLQIPSGATTRVPSNPVDPKLTMSDSHGRIQMQQQVLEQGYVLQQQFDQQQQQQQQPPQQQHQFIHGTQQQVQEAGYVLQPQFEQQQQQQPPQQQHQFIHGTQQQVQEAGYVLQPQFEQQQQQFIHGTRFIHHAPSGAAPLPTFYPMYPSQQQFHPQHHHQLEQQYQIYYVPTRQTQPYNLSAQQPNVSEAATAISSSHAQTTSNPTMVPPSAAYNAMRNAPVPKSEMTAGAYRTAISVTPQVVQVASDQNQQQFVAYSQYHPSQAAAANSAAPAGYAFEYADPAHTQIYFSQPLAPTMPSQYQTMTGAAVHPEVSAQPPSDSMKQHIRTSQPQ 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00817 747 MobiDBLite consensus disorder prediction 220 262 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 1 42 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 341 398 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 461 481 - -
Accr10g00817 747 CDD PB1_UP2 55 154 - -
Accr10g00817 747 Pfam PB1 domain 67 155 IPR000270 GO:0005515
Accr10g00817 747 MobiDBLite consensus disorder prediction 366 398 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 726 747 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 732 747 - -
Accr10g00817 747 SMART PB1_new 66 156 IPR000270 GO:0005515
Accr10g00817 747 ProSiteProfiles PB1 domain profile. 51 156 IPR000270 GO:0005515
Accr10g00817 747 SUPERFAMILY CAD & PB1 domains 67 162 - -
Accr10g00817 747 PANTHER OS05G0427100 PROTEIN-RELATED 19 501 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 17 39 - -
Accr10g00817 747 Gene3D - 71 155 - -
Accr10g00817 747 MobiDBLite consensus disorder prediction 222 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00817 Accr-Chr10 25859009 25861443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00817 38 198 MAP Kinase Kinase Kinase AT1G79570 34.568 1.26e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00817 - - pcin:129311703 1111.67