Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00808 ATGGAAAGAGCTTGTGAATTCTGCACATCTTTGAGGCCAGTGGTTTATTGTAAAGCAGATGAAGCATATCTCTGTCTATCCTGTGATGCAAAGGTCCATAAAGCCAATGCATTGTCCAGCCGCCACCTCAGGACTCTTGTATGTAACCTATGTAGAAACCATTTTGCTTATGCGCAGTGTTTGGATCACCGAATTTTGATCTGCCGTGGCTGTGATCAGAAGCTTCATGATCCCTCCTTAAAACACCAGAAACGAGCTATCAGAAGTTATATGGGGTGCCCTTCTGCCAAAGACTTTGCTGTTCTCTGGGGTTTTGAATTAAATGAGATTGAAAGCAGTGGTTCTGTAGACTTGAATGCAGTGAATCTGTCGGAAAGGTCCGGTAATCAAACCGGAGGCCATTCAATGGTATCATCTGGGGCTAAATTTGATGGAGGATCTAGCAGTCAACAAGGTCAGAAATTGTACAAAGATCTAGAGAGGCAAATTATTCTGCAGCAGATTATTGATTTGAAAAGGTTTCAGATCTGTGAGAACAGTAATCAGTCGGCACTAGTAAATGTGCCGCAAGAAACAGTCTCGTCTTCTCCGATGTATCATACTCGAAAGAACTATGATGAAACATGTGATCAGCATACACAAAACCCCCAGGATTTTAATAATAATAATCTTCAGGAAAGAGACAGTCCCATGGCAGAGATGAAGCTTGAAAGCTTGTCATCCACATTTTCTGAACTTGATAATTTACCTTCATCTCCAATGATAGACCTTCCCTTAAACAGCGAGTTCTTCTGGACATGCAAAAGTACACCTGAAAGTAATCAGTTGTGGTCTCATAATATCCAAGACCTTGGGATATGTGAAGAACTAAGTTGTCAAGATGATTTCAACATTCCTGAGGTTGACTTGACATTCCAAAACTTTGAAGAACTATTTGGAGGAGATCAAGATCCAGTTAGAGGACTGGTTGGTGATAATGATATGTCCTGCTCTTCTATAGAGAAGGATATATCACTTGATAAGTCAGATATCTTCAATGAAAGAACAATGGAGGATTCTTCGGAAGCCGTATCCATTGCTATCTCCCAGTCTGCTAATGACGACAAGGATATTGCTCCTCCAAACCAGTATGATCCAAAAAACATGGACCTTCCTCAAAAAATTAGACCATCTCATTCGACTATATCATTCTCTTTTTCAAGGTGTAACCCTGAAAGCAGTTTTACTGATCACCATGACACTGGTCTTTCTCCTCACAGTGAAGGGAAAGGAAATTCTAGCTATTTCCCAGAACTTGAAGTTTCAAACATGGCGACTGGAGGAAATGACCCTGTGAGGATTAAAGAAAAGAAATCTCAACAGCGCGAAAAGCAAGCTCGAGGTCAAACCAGGAAACCTGGGGCTAATGTAAGAAAGAGGATGAAAGGCCAACCAGCCAAAGCAGAAAGCTATTGA 1455 0.4117 MERACEFCTSLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRTLVCNLCRNHFAYAQCLDHRILICRGCDQKLHDPSLKHQKRAIRSYMGCPSAKDFAVLWGFELNEIESSGSVDLNAVNLSERSGNQTGGHSMVSSGAKFDGGSSSQQGQKLYKDLERQIILQQIIDLKRFQICENSNQSALVNVPQETVSSSPMYHTRKNYDETCDQHTQNPQDFNNNNLQERDSPMAEMKLESLSSTFSELDNLPSSPMIDLPLNSEFFWTCKSTPESNQLWSHNIQDLGICEELSCQDDFNIPEVDLTFQNFEELFGGDQDPVRGLVGDNDMSCSSIEKDISLDKSDIFNERTMEDSSEAVSIAISQSANDDKDIAPPNQYDPKNMDLPQKIRPSHSTISFSFSRCNPESSFTDHHDTGLSPHSEGKGNSSYFPELEVSNMATGGNDPVRIKEKKSQQREKQARGQTRKPGANVRKRMKGQPAKAESY 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00808 484 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Accr10g00808 484 MobiDBLite consensus disorder prediction 363 388 - -
Accr10g00808 484 MobiDBLite consensus disorder prediction 444 462 - -
Accr10g00808 484 MobiDBLite consensus disorder prediction 419 433 - -
Accr10g00808 484 MobiDBLite consensus disorder prediction 127 151 - -
Accr10g00808 484 SMART bboxneu5 1 47 IPR000315 GO:0008270
Accr10g00808 484 SMART bboxneu5 48 87 IPR000315 GO:0008270
Accr10g00808 484 MobiDBLite consensus disorder prediction 404 484 - -
Accr10g00808 484 CDD Bbox1_BBX-like 4 47 - -
Accr10g00808 484 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00808 Accr-Chr10 25601072 25604764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00808 1 319 C2C2-CO-like Transcription Factor Family AT1G68190 38.509 1.24e-61 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00808 - - adu:107467199 511.916