Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00804 ATGGGATTACAGAACCAACTCCGCGACGTCTCTTCCGATTCCATTCCTCTCCTCCTCCTCCTCCACATAGCCGCCGGCTTCAATTACCTCCGCTCCTACCTTCTCGCTTTCCTCCACTCTCTTGGCATCTCCAGATTCCACTCCCACACACCGGCCATCGCCGAAGATGCCCTCTTCGCCGCCGTCGGATCTGGATTAGCCCAACTTGTGATTCTTTCAGACCAGCTCCACGCCAACTATGACCTTACCGATGACGACGATGACCGTGCGATTGCCGCCGCCTCCTCCTCCTCCATGTGTGTGGTGTGCCGGAGCGAGTATAAGGAGGGTGACCAGGTAAGGAGGCTTCCCTGTCGTCACGTATTCCATGGACGCTGCTTCGATGCTTGGCTTCACGAGCTCAAGTTTAATTGTCCTCTCTGTCGATCGGCTCTCGTCTCCGACGAGTGCGTGGCTCTCGCAGAGCGGCGCGTTGGTAGCGAAGTCTGTTCATGGTTCTCTGTTCGGTGA 510 0.5686 MGLQNQLRDVSSDSIPLLLLLHIAAGFNYLRSYLLAFLHSLGISRFHSHTPAIAEDALFAAVGSGLAQLVILSDQLHANYDLTDDDDDRAIAAASSSSMCVVCRSEYKEGDQVRRLPCRHVFHGRCFDAWLHELKFNCPLCRSALVSDECVALAERRVGSEVCSWFSVR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00804 169 SMART ring_2 100 141 IPR001841 -
Accr10g00804 169 SUPERFAMILY RING/U-box 99 147 - -
Accr10g00804 169 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Accr10g00804 169 Pfam Ring finger domain 99 142 IPR001841 -
Accr10g00804 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 147 IPR013083 -
Accr10g00804 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 79 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00804 Accr-Chr10 25366902 25367411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00804 1 168 C3H Transcription Factor Family AT1G15100 47.024 1.86e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00804 K16282 - gmx:100803789 186.422