Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00785 ATGGATAAAAATTTAACTCCTAGTCTTGATCTTGAATTTAACAATATAGAAGAAGCATGGGAATTTTGGAGGGCATACGGTAAAAGAATTGGTTTTGGTGTTCGAAAACAGAGCTTTAACAAGAGTAGAAAAGATAAGTCAAAATATTCTTCTTATCTATATGTTTGTCGTAAAGAAGGGGTGAAGAAACCAGACATTCATAATGTGAAAACTAGGAAGCCCAGAGAAGAGACAAGAACAGATTGCAAAGCAAGAATGAAAGTTAAAGAAGTTAATGGAAAGTACAAAATAAATGAAGTTTTCTTAGATCATAATCATCCTCAAATAATGTTGGTGTTGTATTAA 345 0.3159 MDKNLTPSLDLEFNNIEEAWEFWRAYGKRIGFGVRKQSFNKSRKDKSKYSSYLYVCRKEGVKKPDIHNVKTRKPREETRTDCKARMKVKEVNGKYKINEVFLDHNHPQIMLVLY 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00785 114 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Accr10g00785 114 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00785 Accr-Chr10 24468686 24469030 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr10g00785 FAR1 2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00785 - - pcin:129321958 148.673