Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00776 ATGAAGAGCAGAAGCATGAAGATAGCTTTCCTCTTTCTCCTCATCTATATTTTCTGGGCTTCCTCTACATCTGGAGCCACCAAAATAGATCCATCTGAAAAGGAAGCTCTGAGAAACATAGCGACGACGCTGGGGAAGGAAGATTGGAACTTCAGTGTAGATCCATGCGATACATCTGATCCTGCCTTTTATCTCACCAACTGGTTTACGCCAAACACTGTGGATCCAGAAAGTCGAAACGCTGTCATATGCAATTGCTCCATTGCCAACGACGACCTCTGTCATGTTGTCATCATAATTCTTAAGCAACAAAATCTCAAGGGCAATCTCCCGCCAGAACTCGTTGGATTACCTTACCTTTGCGGAATCGACCTGAGCCACAACTACCTTAGCGGTTCAATCCCTCCAAGTTGGGCCTCTCTTCCACTAAAGAACATTTCTCTTCTTGGTAACCGACTAACAGGTGAAATCCCAGCGGGGGTAGCGAAGATCACTACTCTGCAAAATTTGGTACTCGAGTTCAATCAATTTTCTGGAAATCTTCCTCCTGAGCTTGGCAATGCTCTCCTTCTTGAAAAGCTGTTTCTTACCTCCAACAACTTCACTGGAGAAATACCTCCAACTTTCGCAAAGCTTACTAATTTGAGGGATATTCGACTAGGTGACAATCAATTCTCTGGAGAGATACCTAACTTTATTCAGAATTGGAAACTTCTTGAGAAAATAATGGTTCATGGGAGTGGTTTGAGTGGACCGATTTCTAGAATTTCATTTCCTGAAAACTTAATTCACTTGGTTATAAGTGACTTAAAAGGACCTGAGTCAACTTTTCCTGCACTCAATATCTTGACAAAATTGAAAACACTGATATTGAGGAGTTGCAATATCAATGGAACAATACCTCTCACTCTTGGGAGTATGCGTGATTTGAAAATCTTAGACCTGAGCTTTAACAAATTGCAAGGAAAAATTCCAGATACCTTTGCTCAACTATCACAAGTGGATGACATGTACTTAACTGGAAACCTTCTCAATGGATCTGTGCCTGAGTTGCACAATGTTGAATACATGGATTTTTCATATAACAACTTTACCAGCCGAACTACAGGGGAGAAGTGTGATCAGCCAAATGTGAACCTGTTTGGAGACCCATTGATGGCCAATGACTCAGGATCTGTTACTTGCATGAGAAGCACTTGTTCTGAAACTTGGTACTCTGTCAACATAAATTGTGGTGGAAGTGGGGCCACCATTGAAGGTCAAATGTATGATGGTGATTTGGATCTAGTTAGACGCGGATTTGCAAAGAGTGGAGCTAACTGGGCAATTAGTAGTACTGGTCACTTTTTAGATGCAAAACAAAAGTATAACTACGTTGCAGAAAACAAATATAATCTCTCTGTTCCCAATGTTGAACTGTACAGCAATGCACGTCTTTCCCCAATTTCTCTGACCTATTACGCTTATTGCCTGGGAAATGGACAGTACACAGTGAGGCTCCATTTTGTGGAGATAATGTTCACTGATGATCAAACATTTAAAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGAACAGCTAGTGCTGAAGGATTTCAACATTGTAAATGAAGCAGGGGGGGTTGGTAAGCTAGTCATAAAAAAGTTTACCGTAAATGTGACTAGTGGCACCTTAAAGATTCGCTTCCACTGGGCTGGGAAAGGAACAACTGCTATACCAGAAAAGTCAGTTTATGGCCCCCTAATTTCAGCTATAGCTATAACTTCTGATTTTAAAACCGCAAGAAGCATCCCGGGAGCAGTTGTGGCTGCAATTGTGGCTGCAGGAGTGGGCATTGTCATCTTGATATTGGGCATTCTGTGGTGGAGAGGTGCCCTAGGAAAAAGAAGTTCATTAGCAATAGAGCTAAAGAGCTTAGATCTGCAAGCCGGTTTATTTACCTTGCGGCAAATTAATGCAGCAACAAATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTTTATCAGATGGCACAATGATAGCAGTGAAGCAGCTTTCTTCTAAATCAAACCAAGGAAACCGTGAGTTTATCAATGAGATAGGCATGATCTCTGCTTTGCATCACCCTTGCCTTGTTAAGCTCTATGGTTGTTGTGTGGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCATGCCTTGTTTGGACGAGAGGAATGCCATTTAAAATTAGATTGGCCAACGAGACAGAAGATTTGTGTTCATATTGCCCGAGGTTTGGCTTTCCTTCATGAAGAATCGAGACTAAAGATTGTTCATCGGGACATCAAGGCCACTAATGTGCTACTTGACAAAGACCTAAATGCAAAAATATCAGATTTTGGGCTAGCAAAGCTTGATGAAGAGGAAAATACCCACATAAGCACTCGAATTGCTGGGACCTACGGATACATGGCACCTGAGTATGCAATGCATGGGTATTTGACCGACAAAGCAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAAATTGTAAGTGGAAGGAGTAATACTTTACGCCAACAAAAGGAAGACTGCTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATCTAATGGAGCTAGTTGATTCAAGGCTAGGTTCAGAATTTGACACAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACCAATCCATCTTCATCACTCAGGCCCGCCATGTCTTCAGTACTAGGCATGCTCGAAGGAGTAACTGTAGTTCCGGAAATCGTTTCTGATCAAAGTGAGGAAGCACGTAAGATGAAGCTGGAAGCAATGAGACAGTATTATAGAGAGGTAGAAGGAAATCAAAAGAATGATGAGCCTGAAACTCATTCCAAGAGTCTCTTAGGGATGTCCACTTCTTCGTCCACATCAGCTAGAGATCTCTACCCTGTTCACCTAGATTCTTCCTATTTCGAGCAAAGAAAATCTTAA 3027 0.4179 MKSRSMKIAFLFLLIYIFWASSTSGATKIDPSEKEALRNIATTLGKEDWNFSVDPCDTSDPAFYLTNWFTPNTVDPESRNAVICNCSIANDDLCHVVIIILKQQNLKGNLPPELVGLPYLCGIDLSHNYLSGSIPPSWASLPLKNISLLGNRLTGEIPAGVAKITTLQNLVLEFNQFSGNLPPELGNALLLEKLFLTSNNFTGEIPPTFAKLTNLRDIRLGDNQFSGEIPNFIQNWKLLEKIMVHGSGLSGPISRISFPENLIHLVISDLKGPESTFPALNILTKLKTLILRSCNINGTIPLTLGSMRDLKILDLSFNKLQGKIPDTFAQLSQVDDMYLTGNLLNGSVPELHNVEYMDFSYNNFTSRTTGEKCDQPNVNLFGDPLMANDSGSVTCMRSTCSETWYSVNINCGGSGATIEGQMYDGDLDLVRRGFAKSGANWAISSTGHFLDAKQKYNYVAENKYNLSVPNVELYSNARLSPISLTYYAYCLGNGQYTVRLHFVEIMFTDDQTFKSLGRRVFDVYIQEQLVLKDFNIVNEAGGVGKLVIKKFTVNVTSGTLKIRFHWAGKGTTAIPEKSVYGPLISAIAITSDFKTARSIPGAVVAAIVAAGVGIVILILGILWWRGALGKRSSLAIELKSLDLQAGLFTLRQINAATNNFDASNKIGEGGFGPVYKGFLSDGTMIAVKQLSSKSNQGNREFINEIGMISALHHPCLVKLYGCCVEGDQLLLVYEYMENNSLAHALFGREECHLKLDWPTRQKICVHIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTLRQQKEDCFNLLNWAHVLKENGYLMELVDSRLGSEFDTEEVMVMINVALLCTNPSSSLRPAMSSVLGMLEGVTVVPEIVSDQSEEARKMKLEAMRQYYREVEGNQKNDEPETHSKSLLGMSTSSSTSARDLYPVHLDSSYFEQRKS 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00776 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 592 - -
Accr10g00776 1008 Gene3D Ribonuclease Inhibitor 259 374 IPR032675 -
Accr10g00776 1008 Pfam Protein tyrosine and serine/threonine kinase 663 881 IPR001245 GO:0004672|GO:0006468
Accr10g00776 1008 Gene3D Ribonuclease Inhibitor 164 258 IPR032675 -
Accr10g00776 1008 CDD STKc_IRAK 666 933 - -
Accr10g00776 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 735 - -
Accr10g00776 1008 MobiDBLite consensus disorder prediction 976 991 - -
Accr10g00776 1008 SMART serkin_6 660 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00776 1008 SUPERFAMILY Protein kinase-like (PK-like) 644 939 IPR011009 -
Accr10g00776 1008 MobiDBLite consensus disorder prediction 963 991 - -
Accr10g00776 1008 SUPERFAMILY L domain-like 90 366 - -
Accr10g00776 1008 Gene3D - 403 593 - -
Accr10g00776 1008 ProSiteProfiles Protein kinase domain profile. 660 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00776 1008 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Accr10g00776 1008 Gene3D Transferase(Phosphotransferase) domain 1 736 958 - -
Accr10g00776 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 962 - -
Accr10g00776 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 943 - -
Accr10g00776 1008 Pfam Malectin domain 406 587 IPR021720 -
Accr10g00776 1008 Gene3D Phosphorylase Kinase; domain 1 628 735 - -
Accr10g00776 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 35 205 - -
Accr10g00776 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Accr10g00776 1008 Gene3D Ribonuclease Inhibitor 52 163 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00776 Accr-Chr10 23886273 23898834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00776 17 963 Receptor kinase-like Gene Family AT1G53420 53.333 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr10g00776 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00776 - - qsa:O6P43_001072 1199.5