Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00733 ATGGAAAGGGAGGAAAGAATGAGGCTGAGAGTAGCAATTATCACAAGAAGACGGCCAAGAGTACGCTCAAGTGCTCCGTATGCTCAGCAACAGCCGATGCGAGGCCATGTGTATCGATGGCACCAAGCGGCTCTGCCATATCCATGGCAAGATGCACAAGAAGGTCTGGATTGCTGCCGACGAAATAATCCTCGTCAGCCTCCGGATTACCAGGACGACAAGGCCGATGCAATCCTCAAGTACATGCCCGATGGAGCTAGGCTCTTGAAGGCTTATGGGGAGTTGCCCGACAACACCAGACTCAACGAGGGTATTGGCGGATTGGATGAGGAGGATGATGGCACTGGCAACGATCATATCGAGTTTGAGGACGAGGATATTGATAAGATTTAA 393 0.5115 MEREERMRLRVAIITRRRPRVRSSAPYAQQQPMRGHVYRWHQAALPYPWQDAQEGLDCCRRNNPRQPPDYQDDKADAILKYMPDGARLLKAYGELPDNTRLNEGIGGLDEEDDGTGNDHIEFEDEDIDKI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00733 130 SUPERFAMILY Nucleic acid-binding proteins 67 129 IPR012340 -
Accr10g00733 130 Gene3D - 66 130 IPR012340 -
Accr10g00733 130 PANTHER EIF-1A 69 130 IPR001253 GO:0003743|GO:0006413
Accr10g00733 130 MobiDBLite consensus disorder prediction 100 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00733 Accr-Chr10 21796578 21796970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00733 69 130 Eukaryotic Initiation Factors Gene Family AT2G04520 74.603 4.53e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00733 K03236 - bvg:104886743 106.686