Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00691 ATGTCTTGTTCTTCGTCATCATCAAGATCGCTTGTGTCTATGGGCTCATCAGAAAGCTCAACCACAGTACTCCAACAACGTCTTCAATTCATTTTGCACAACCGAACTGAGTGGTGGGTGTATGTCATTTTCTGGCAAGCTTGGAAAGAAGATAGCAGTAGTAGTACAAGGAGCCAAGTGTTGTTAAATTGGGGTGATGGCCACTTCCGTGGAACCAGAGAGTCCAAGTCCAAGGAAACCGCCACGAGTGATGATCAATGGCCAAGCCCTAACGGAGGCCGAAAGATGAAGTTGATTATTCCAAAACACATGGAGGGCGGCGGCGACGGACATCTAACTGAGTTGGAATGGTTTTATACAGTATCGTTGACTCGATCGTTTGCCGCCGGCGATGATGTGGTGGGGCGTGCCTTCGGCTCAGCCACACATGTTTGGTTGGCCGGAGCCAACACCGGCCTCAGCGGCAGGGAGCTGCAGGTCCACGAGTGTGAGAGAGTTCGAGAAGCGTTCGCTCATGGAATCCAAACTCTGGTGTGCATTCCCATCCCTAATGCACTTGGAGTTCTTGAGCTAGCCTCCAATGACTTAATAACCCAAGATTGGAGCCTTATTCAAGCTGTTAAATCAGTCTTCGAGTTCGACAACGTCTTTATCCCCAGTCCACCAGGTCTGGGTTCTGAGCCTTATCATTATTTCAAGAACGAAGCTCTCAATGACTCTGAAGAAGCTCTTCTTGTATCTCCCTCTTCCAAGCCTCGATCCATCAGAAAAAAGGGAAGAAATGAGGCTGATAAAGCACAAGAGCTAATAATACCTCTAAACCACGTGGAGGCCGAGAGGCAAAGAAGAGAGAGACTGAATCAAAGATTCTATGCTCTCCGTTCCGCCGTTCCTAATGTTTCCAAAATGGACAAAGCTTCTCTGCTCTCTGACGCGGTCACCTACATCAATGAACTCAAGGCGAAAATTGAGGAACTAGAGACTAGATTCAAGAAAACTGAGGGCAAAGAAGCTCTGGCGACAATGCATTATAGTCACTCGAGTTCTGAAGCGAGTGCGATTGGTGTTGAGGTCAACATTGTGGGGGCGGAGGCGATGATAAGGGTTCAGTGCCTGGATGTGAATCACCCAACTGCAAGGTTAATGGATGCTCTAAGACAACTTGATTTTCATGTTCATCATGCCAGCGTATCAAGAGTCAAAGACCTCATGCTGCAAGACGTCGTTGTCCGGGTTCCCAATAATTTCATGACTGCCCAGGCCATGAAAAATGCCATTCTACAACGTTTATAG 1293 0.4772 MSCSSSSSRSLVSMGSSESSTTVLQQRLQFILHNRTEWWVYVIFWQAWKEDSSSSTRSQVLLNWGDGHFRGTRESKSKETATSDDQWPSPNGGRKMKLIIPKHMEGGGDGHLTELEWFYTVSLTRSFAAGDDVVGRAFGSATHVWLAGANTGLSGRELQVHECERVREAFAHGIQTLVCIPIPNALGVLELASNDLITQDWSLIQAVKSVFEFDNVFIPSPPGLGSEPYHYFKNEALNDSEEALLVSPSSKPRSIRKKGRNEADKAQELIIPLNHVEAERQRRERLNQRFYALRSAVPNVSKMDKASLLSDAVTYINELKAKIEELETRFKKTEGKEALATMHYSHSSSEASAIGVEVNIVGAEAMIRVQCLDVNHPTARLMDALRQLDFHVHHASVSRVKDLMLQDVVVRVPNNFMTAQAMKNAILQRL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00691 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 270 319 IPR011598 GO:0046983
Accr10g00691 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 273 343 IPR036638 GO:0046983
Accr10g00691 430 MobiDBLite consensus disorder prediction 72 95 - -
Accr10g00691 430 Pfam Helix-loop-helix DNA-binding domain 274 319 IPR011598 GO:0046983
Accr10g00691 430 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 24 211 IPR025610 -
Accr10g00691 430 Gene3D - 272 335 IPR036638 GO:0046983
Accr10g00691 430 Coils Coil 309 336 - -
Accr10g00691 430 SMART finulus 276 325 IPR011598 GO:0046983
Accr10g00691 430 PANTHER MYC 14 429 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00691 Accr-Chr10 19935670 19936962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00691 16 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 36.902 3.95e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr10g00691 bHLH-MYC_N 4.5e-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00691 - K13422 pcin:129310791 556.984