Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00690 ATGAGTTCTCACCAGAAAGATGGCACAAGCTACCAGCTGTCGAAGCCGAAGCCTTGCGCCAACAACTGTGGCTTCTTCGGCACCGCTGGCACCATGAACCTCTGCTCAAAATGTTACAGGGACTTCCAAATTAGCAAGCCGCTTCCGCTAAAGCCGCCATGGAGAAATCACTCAACCCTAGATCCGTTACCTCACCTAATCAAACGACGGAATCGAACCCTTCAGCGCAACCCAGAGAACACCTTTCACAATGACAGTTCCAAAAATAATATTTCATCTTAA 282 0.4823 MSSHQKDGTSYQLSKPKPCANNCGFFGTAGTMNLCSKCYRDFQISKPLPLKPPWRNHSTLDPLPHLIKRRNRTLQRNPENTFHNDSSKNNISS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00690 93 MobiDBLite consensus disorder prediction 77 93 - -
Accr10g00690 93 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Accr10g00690 93 MobiDBLite consensus disorder prediction 50 93 - -
Accr10g00690 93 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Accr10g00690 93 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Accr10g00690 93 Gene3D - 2 59 - -
Accr10g00690 93 MobiDBLite consensus disorder prediction 62 76 - -
Accr10g00690 93 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00690 Accr-Chr10 19801473 19801754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00690 19 42 C2H2 Transcription Factor Family AT3G52800 66.667 9.99e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00690 - - zju:107403429 87.0409