Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00671 ATGGAACAGAAAGGCTTGTTGATCTCAGCGTTAAGTGTTGGTGTAGGAGTTGGAGTGGGCATTGGGTTGGCTTCTGGGCAAAACGTAAGCAAATGGGGAGCTAATACTTGTTCCTCAAACGCCCTTACTGTGGAAAAGATTGAGCAAGAAATGCTTCGATTAGTTGTTGATGGCAGAGAAACCAAAGTCACCTTCGATCAGTTTCCTTATTATCTCAGTGAGCAGACACGCGTGTTGCTGACAAGTGCCGCTTATGTCCATTTAAAAAATGCCGAGGTCTCTAAATTTACACGTAACCTTTCTCCGGCAAGCCGGACTATTCTACTCTCTGGACCAGCAGAACTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAAGCAAAGTTGCTGCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGCAGATATGGTTCTGGCAACAAAGAACCCGTTTTTAAAAGGTCCACTTCAGAGTCAACTTTGGAGAGACTATCTGGCTTATTTGGGTCATTTTCAATTTTTCCTCAGAAGGAGGAACTTAAAGTTGCAGGAAAAATCATCAGACAAAGCAGCGGAGTGGACCTCAGATCAATAGGGGGTGATGGATCTTGCAATTCTCCTAGCATTCGTCGGAATGCTTCTGCCTCTGCAAATATCGGTAGCCTTGCCTTGCAAAATACTCCATCTAATTCAGGTACTCTTAGGCGCACAACCAGTTGGTCTTTTGATGAAAAGCTTCTTATTCAATCTCTTTACAAGGTTCTCAGTTATGTGTCAAAAACTTATCCCATAGTGCTGTATCTGCGGGATGTTGATAAGTTGCTTAATAGATCACAAAGGACTTATAAGTTGTTACAAAAAATGTTGGAGAAACTATCTGGACCAGTATTGATTCTCGGTTCTCGAGTTCTGGATCCTGGTAATGACTACAGTGAGGTAGATGAGAAAATTGTTTCAGTCTTCCCGTACAACATTGAAATTAGACCCCCAGATGATGAATCACATCTTGTAAGCTGGAAAACTCAACTAGAAGAAGATATGAAAAAGATACAGGTTCAGGATAATAAAAATCATATTTTGGAAGTACTTTCAGCCAATGATCTTGATTGTGATGATCTTGATTCCATATGTGTGGCAGACACAATGGTTCTTAGTAATTACATAGAAGAGATTGTTGTTTCAGCAATTTCTTATCATCTAATGAGAAACAAAGACCCAGAGTACAGAAATGGGAAACTTGTTATGTCTTGTAACAGTTTATCTCAAGCATGGAGTGTATTCCGAGAGGGAAAATCCAATAGAAGGGATACACTAAAATTGAAAGCTGAAGATGTTACATCAGAGAAGGAAAGAGGGAATGGTGCTGCTGTGAAACCTGAAGCCAAGTCTAAAAACCGAGCTCCAGAAAAGAAAACCAAAGAAGCAGCAACAGCTTCAGTGGAAAAGGTTGAGAATGCAACTTCAGCTCCTCCAGAACCCAAAGTTGCTGAACCTCCTCCAGATAATGAGTTTGAGAAGCGAATAAGGCCAGAGGTAATACCAGCAAATGATATTAACGTGACATTTGCTGATATTGGTGCCTTAGAAGAGACTAAAGAATCCCTTCAAGAACTAGTGATGCTCCCACTACGAAGGCCAGACCTTTTCACCGGTGGCCTTCTGAAGCCTTGTAGAGGAATATTGCTGTTTGGTCCACCTGGCACAGGAAAGACAATGTTGGCTAAGGCCATTGCAAGGGAGGCTGGAGCAAGCTTTATCAATGTATCTATGTCTACCATAACATCCAAATGGTTTGGTGAAGACGAAAAGAATGTTCGAGCTTTGTTCACATTGGCAGCTAAGGTCTCACCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTTGGAGAGCATGAAGCCATGAGAAAAATAAAGAATGAATTCATGACTCACTGGGATGGCCTTATGACAGAGCCAGATCAGCGCATTCTTGTTCTTGCTGCAACCAATAGGCCCTTTGATCTAGATGAAGCCATTATCAGGAGATTTGAAAGAAGAATTATGGTAGGGCTTCCATCTGCAGAAAACAGGGAAAAGATTTTCAGGACTCTTTTGGCAAAAGAAAAGGTAGATGATCAGCTTGATTTTAAGGAATTAGCAACTATGACAGAAGGATATTCTGGAAGTGATTTGAAGAACCTTTGCACAACTGCTGCTTACCGGCCTGTACGAGAGTTAATTCAGCAAGAGAGACAGAGGACTCTGAAGAAGAAGCAGAAAGCTGCTAATGTAGATGTACGAGGTAGACAAGGGGAACAATCAACTGCAGAAAATGCCCCAGGTGCTGTGAATGCAAAAGAGGAAGTTGAACAAGAAAGAATTATTGTCCTTAGGCCATTGAATATGCAGGACTTCAAAGAGGCGAAAGTTCAGGTCACAATTCTCTTCCATCTGAACTTGATGGAGTTTTCTGTCAACTACATAGGATGA 2505 0.4144 MEQKGLLISALSVGVGVGVGIGLASGQNVSKWGANTCSSNALTVEKIEQEMLRLVVDGRETKVTFDQFPYYLSEQTRVLLTSAAYVHLKNAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSGNKEPVFKRSTSESTLERLSGLFGSFSIFPQKEELKVAGKIIRQSSGVDLRSIGGDGSCNSPSIRRNASASANIGSLALQNTPSNSGTLRRTTSWSFDEKLLIQSLYKVLSYVSKTYPIVLYLRDVDKLLNRSQRTYKLLQKMLEKLSGPVLILGSRVLDPGNDYSEVDEKIVSVFPYNIEIRPPDDESHLVSWKTQLEEDMKKIQVQDNKNHILEVLSANDLDCDDLDSICVADTMVLSNYIEEIVVSAISYHLMRNKDPEYRNGKLVMSCNSLSQAWSVFREGKSNRRDTLKLKAEDVTSEKERGNGAAVKPEAKSKNRAPEKKTKEAATASVEKVENATSAPPEPKVAEPPPDNEFEKRIRPEVIPANDINVTFADIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTEPDQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREKIFRTLLAKEKVDDQLDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERQRTLKKKQKAANVDVRGRQGEQSTAENAPGAVNAKEEVEQERIIVLRPLNMQDFKEAKVQVTILFHLNLMEFSVNYIG 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00671 834 ProSitePatterns AAA-protein family signature. 668 687 IPR003960 GO:0005524|GO:0016887
Accr10g00671 834 SMART AAA_5 561 698 IPR003593 GO:0016887
Accr10g00671 834 Pfam ATPase family associated with various cellular activities (AAA) 565 695 IPR003959 GO:0005524|GO:0016887
Accr10g00671 834 MobiDBLite consensus disorder prediction 447 483 - -
Accr10g00671 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 378 IPR027417 -
Accr10g00671 834 Gene3D - 39 355 IPR027417 -
Accr10g00671 834 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 817 - -
Accr10g00671 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 760 IPR027417 -
Accr10g00671 834 Gene3D - 524 696 IPR027417 -
Accr10g00671 834 MobiDBLite consensus disorder prediction 762 790 - -
Accr10g00671 834 MobiDBLite consensus disorder prediction 447 509 - -
Accr10g00671 834 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 524 699 - -
Accr10g00671 834 Pfam AAA+ lid domain 719 760 IPR041569 -
Accr10g00671 834 Gene3D - 697 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00671 Accr-Chr10 18728702 18734438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00671 525 755 Calmodulin-binding Proteins AT3G56690 38.136 7.53e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00671 - - pcin:129311736 1384.01