Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00663 ATGGGATTTTCAGTGGGCTGTACCGTGCTCGTCTTGCCAAAGCTCATCCTCCAGGTCCTCGCCGTACTTGGAATCCTCAGGGAAATCACATCGTTCCTCCTTCGCTCCTTCGGCTTCAGCAATTTTCTCGAACAGGACATTCAGTACTTTGAGGATTCCGACAACCCGTACTATCATTATTATCCTGCCCAGATGCCCGAATTCGAGTCGGCGAGCGCGGTGCTGATCCGAGAGATGCTGCTGGTGACGAAGTTCTCTGAGCTGGCGGCGGAAGAGGTGGTGGCGCCGGAGAGCTCTTGCGCCGTGTGCCTGAACGAATTTGATGGCAACGATGAGATCCGACAGCTGACAAACTGCCGCGACGTCTTCCACAAGGAGTGTCTTGACCGTTGGTTGGGATGCGATCAGAAAACTTGTCCGTTGTGTCGATCACCGTTCATACCTCACCATTTGCAAGAAGCTTTTAACGAGTCTCTGTGGGCTGCTTCTGGTATACCTGAATTTTACCCAGAATCTGATTCAGAATTATTATTATGA 537 0.5121 MGFSVGCTVLVLPKLILQVLAVLGILREITSFLLRSFGFSNFLEQDIQYFEDSDNPYYHYYPAQMPEFESASAVLIREMLLVTKFSELAAEEVVAPESSCAVCLNEFDGNDEIRQLTNCRDVFHKECLDRWLGCDQKTCPLCRSPFIPHHLQEAFNESLWAASGIPEFYPESDSELLL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00663 178 SUPERFAMILY RING/U-box 76 149 - -
Accr10g00663 178 PANTHER RING ZINC FINGER PROTEIN-RELATED 51 161 - -
Accr10g00663 178 ProSiteProfiles Zinc finger RING-type profile. 100 143 IPR001841 -
Accr10g00663 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 148 IPR013083 -
Accr10g00663 178 CDD RING-H2_RHA1-like 97 146 - -
Accr10g00663 178 Pfam Ring finger domain 99 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00663 Accr-Chr10 17166535 17167071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00663 1 164 C3H Transcription Factor Family AT1G63840 42.515 1.99e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00663 K16281 - gmx:102665617 206.068