Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00635 ATGGTGCCAGAAAACATGAAGAAACAACTTGCTTTGGCTGTGAGGAGCATCCAGTGGAGCTATGCCATATTCTGGTCTGCTTCTAGTAGCCAACCCAGGGTTTTGAAATGGGGTGAGGGATATTACAATGGCGACATAAAGACTAGGAAAACAAGTCAGGCAGCACAACGTAGTTCTGACCAAATAGGTTTGCAGAGGAGTGAGATGTTGAGAGAGCTATTTGAGTCCCTTACAACTGCAGAATTCGCCGCCACACAAATTAAAAGGCCTTCATCAAATGCGCTAAGCCCTGAAGACCTCACCGGTGCTGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTCAATATTGGCCAAGGATTACCTGGACGAACTCTGGCAAATGGCCAACCAATTTGGGTTTTCGATGCCCCTCATGCTGATGCTAGAGTTTTTAGTCGCTGTGTGCTCGCAAAGAGTGCATCCATTCAGACTGTAGTATGCTTCCCTTTTCTGGAAGGTGTTGTTGAGCTGGGGACGAGTGATCTGATTTCAGAAGATCTCAGTCTCATTCAACGTATAAAAACTTCTTTCCTGGACATTCTGAATTCCAATGTGTCTATAGCATTTGGCCACAGTGCTTATGATGCCGAATTACCAAAAGGGGGATATGCTGTAAACAACAAAACTTTTGCCTATAGTTCAACTGCGATTGAAGCAAACTGGCCAGCAGATGAGACACATATGGTTGAAGGAATAAGTGGTGGTGCTTCTCAGGTCCAAAGCTGGCAAGTTATGGATGATGAATTGAGTAATGATGCCCATAACTCAATGACAACTAGTGACTGTAGTTCTCAAACTCTTGCTGATCCTGAAAAAAGTGCCTCTGTTCCCAAGGATCAAAACCCAACTGACCACTCTGTGCAAGACCTCCAAGAGTGGCATTATCGAAAAGTTCTTTCTGCAGTTCTAAAGGATTCAAACCCATTAGCTATTGGAGAGCATTTTCAAAGTAGTGATAAGGAATCCAGCTTTGTTAGTTGCAAGAAAAGAGGATCGATGAGTTGTCAAATGCTAACAGGAGGAGGAACCCCACAGAAGTTGTTAAAGAAGGTATTGTTCGAAGTTCCTCGGATGCATATGGACTTGCTTCTTGAAATCCAAGAAGAAAATGATTACAAAGAGAGAATGAGACCAGAGGTTGATGAAATTGGCATGAACCATGTGTTGTCAGAAAGAAGGAGAAGGGCGAAACTAAATGAAAGGATCTTAACCCTTAGATCAATGGTCCCTTCAGTTAGTAAGGATGACAAAGTTTCAATACTAGATGATGCAATCGAATACCTTAGGAAGCTTGAGAAGAAGGTTAGAGAACTGGAAGCATGTAGGGAGCTAATAGATTTAGAAACCAAAGCTGAAAGAACGCCTCAAGATATAGTAGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCATGAAGTCAATGAATAACAAGAGAAAGGCATGTGAGATTGAAGAAGAGACATGGCTAGAGAATGATTCATTTGCTCTAAATGACAGTTCTACAAGTAGCGTGACCATCAGTTTGAGCAACACTGATGTTCTGATTGAGGTGAAATGTCCGTGGAGGGAAGGTATAGTGCTGAACGTTATGGAAGCACTTAAGAGTTTCCACGTGGATTTACGATCAATTCAGTCATTAGAAGCTGATGGGATTCTTCATCTAACCATTAGATCCCAGTTGAGAGTACCAACCATCACCTCAGCAAAAAAGATAAAACAAGCGCTGCAAAAAGTAATTTGGAACGGTTGA 1800 0.4183 MVPENMKKQLALAVRSIQWSYAIFWSASSSQPRVLKWGEGYYNGDIKTRKTSQAAQRSSDQIGLQRSEMLRELFESLTTAEFAATQIKRPSSNALSPEDLTGAEWYYLVCMSFVFNIGQGLPGRTLANGQPIWVFDAPHADARVFSRCVLAKSASIQTVVCFPFLEGVVELGTSDLISEDLSLIQRIKTSFLDILNSNVSIAFGHSAYDAELPKGGYAVNNKTFAYSSTAIEANWPADETHMVEGISGGASQVQSWQVMDDELSNDAHNSMTTSDCSSQTLADPEKSASVPKDQNPTDHSVQDLQEWHYRKVLSAVLKDSNPLAIGEHFQSSDKESSFVSCKKRGSMSCQMLTGGGTPQKLLKKVLFEVPRMHMDLLLEIQEENDYKERMRPEVDEIGMNHVLSERRRRAKLNERILTLRSMVPSVSKDDKVSILDDAIEYLRKLEKKVRELEACRELIDLETKAERTPQDIVERTSDNYFNKTDNGMKSMNNKRKACEIEEETWLENDSFALNDSSTSSVTISLSNTDVLIEVKCPWREGIVLNVMEALKSFHVDLRSIQSLEADGILHLTIRSQLRVPTITSAKKIKQALQKVIWNG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00635 599 Gene3D - 396 457 IPR036638 GO:0046983
Accr10g00635 599 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 191 IPR025610 -
Accr10g00635 599 PANTHER TRANSCRIPTION FACTOR TT8 2 597 - -
Accr10g00635 599 SMART finulus 402 451 IPR011598 GO:0046983
Accr10g00635 599 Gene3D - 64 173 IPR029016 -
Accr10g00635 599 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 396 445 IPR011598 GO:0046983
Accr10g00635 599 Pfam Helix-loop-helix DNA-binding domain 400 446 IPR011598 GO:0046983
Accr10g00635 599 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 399 459 IPR036638 GO:0046983
Accr10g00635 599 Coils Coil 435 462 - -
Accr10g00635 599 MobiDBLite consensus disorder prediction 265 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00635 Accr-Chr10 13600409 13603988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00635 2 597 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 45.586 2.80e-169 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr10g00635 bHLH-MYC_N 7.8e-50 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00635 - - ahf:112732736 707.983