Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00627 ATGGATGGGAGGGAAGCTATGGCATTCTCTGGTGGCTCAGCTCCATATTACATGCACAGAGGAAATGTTTCTGGGTCTGGCTCGGGAACACCAGCCCAGGGGTTCCAACAATCACGTCCTGGGTTTAGACCTTTGTCAAACGTTGGCTTTCAAGCTCAGTCTAATGTCCGAGGTGGTTCTTTGGGATCCACATTTTCAGTGGAGCCTCCTCGGAGCAATTTTAGTCAAGCCACTAACATAAGCTCTTCTCCTGGAGGAGTACCTTCTTCAGGCGAGCCCTTGAAAAAGAAGAGAGGAAGGCCTCGTAAGTATGGTCCTGATGGCCCCGTTTCTTTGGGACTGTCTCCCATGTCTGCAACTGCCAATTCTACCCCAGGTTCAGGCACACCTTCCCAGAAGCGGAATAGAGGACGTCCACCTGGTTCTGGTAGGAAGCAGCAGCTAGCGGCTCTAGGTGAATGGATGAACAGTTCGGCTGGACTAGCTTTTGCTCCTCATGTTATCACCATTGAAATTGGGGAGGACATTGTAGCAAAGTTGTTGTCTTTATCACAGCAGAGACCAAGGGCTCTCTGCATCATGTCGGGCACTGGTGCAGTTTCTTCTGTCACTCTACGCCAACCTGCTTCAACAAACATCAGTCTCACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCAGGCTCATACTTGGTTGCTGAAGATGGTGGTCCTCGCGATAGAACAGGGGGTTTGAGTGTTTCTCTTTCTACCCCTGATGGTCAAGTTATTGGTGGCGGTGTTGCTGTGCTTATTGCCGCAAGTCCAGTTCAGGTGGTGGTGTGCAGTTTTGTATATGGAAGCGCTAAGATGAAGACAAAGCAAGTAACCTCTCCAAAGGCTGAGAAGAATTCTGAGCCTAAGACTCAGACTCAAACTCAGCCTCATCCTCAGCGTAATGCTAACAATTTAAATAGCCCTATTAATCCAGCAAGTGCTCAAAACTACACATTATCTGCATCAGCGATGTGGCCAGGAGGAGACCTGAAAGGCTCACACACACATTCTCATACCGGTATTGACTTGACCCGCGGCTGA 1077 0.4893 MDGREAMAFSGGSAPYYMHRGNVSGSGSGTPAQGFQQSRPGFRPLSNVGFQAQSNVRGGSLGSTFSVEPPRSNFSQATNISSSPGGVPSSGEPLKKKRGRPRKYGPDGPVSLGLSPMSATANSTPGSGTPSQKRNRGRPPGSGRKQQLAALGEWMNSSAGLAFAPHVITIEIGEDIVAKLLSLSQQRPRALCIMSGTGAVSSVTLRQPASTNISLTYEGRFQILCLSGSYLVAEDGGPRDRTGGLSVSLSTPDGQVIGGGVAVLIAASPVQVVVCSFVYGSAKMKTKQVTSPKAEKNSEPKTQTQTQPHPQRNANNLNSPINPASAQNYTLSASAMWPGGDLKGSHTHSHTGIDLTRG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00627 358 Pfam Plants and Prokaryotes Conserved (PCC) domain 165 278 IPR005175 -
Accr10g00627 358 ProSiteProfiles PPC domain profile profile. 157 299 IPR005175 -
Accr10g00627 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 328 IPR039605 GO:0003680
Accr10g00627 358 CDD DUF296 165 277 IPR005175 -
Accr10g00627 358 Gene3D - 165 297 - -
Accr10g00627 358 MobiDBLite consensus disorder prediction 286 325 - -
Accr10g00627 358 SUPERFAMILY AF0104/ALDC/Ptd012-like 163 283 - -
Accr10g00627 358 MobiDBLite consensus disorder prediction 115 136 - -
Accr10g00627 358 MobiDBLite consensus disorder prediction 1 147 - -
Accr10g00627 358 MobiDBLite consensus disorder prediction 23 88 - -
Accr10g00627 358 MobiDBLite consensus disorder prediction 295 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00627 Accr-Chr10 13220034 13229539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00627 1 358 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.485 8.26e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00627 - - qsa:O6P43_034235 472.241