Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00615 ATGTTAACGGAGCAAAATTATTGGAGATGCATCAGCAACTTCAACTTCCAGTGCTGCGGTAACCTGTCGCCGGAGCAACACTATCCGTCGATGACGAGATTTCCGAGAGGCTCCTCGCCGGAGGACGTGTTGAGTTCGCCGCAGGGTAAAGCAGTTTTCAGCGTCACCGGAATGACGTGCGCTGCCTGTGCTGGATCGGTGGAGAAAGCCGTCAAACGCCTCCCTGGAATTCGCGACGCTGTCGTCGATGTCTTGAACGGTAAAGCGCTGGTTCGTTACTTTCCGTCAATGGTTACTGAGGAGAGAATAAGAGAGGCCATTGAAGATGCTGGATTTGAAGCAAAATCCATTGACGAAGAATCAATAAAAGAGAAGCCTTTTCAAATCTGCAGAATACACATAAAGGGTATGACTTGTACTTCTTGCTCCTCCACTGTTGAATCCCTTCTTCAAGCCATTCCTGGAGTTCAGAAATCACAAGTGGCCTTGGCAACTGAAGAAGCTCAAGTCCATTATGATCCAAAGATTGTCACCTACAATCACCTAAAGGAAGCCATTGAAGAAGCAGGATTTGAAGCCATACTGAAGAGCACAGGTGAACACATAAGCAAAATAGAGTTGAAAATTGAAGGCCTAAAAATTGATCAGTCCTTGAGGGAGATTCACAAGTCTCTCCAGTCACTTCCAGGAGTTGAAAACATAGACATTAATCAAGAAATGAAGAAAGTTTCCATTTCCTATAAACCATACATGACAGGACCCAGAACTTTCATTGAAGTCATAGAATCATCTTCGGGCTCTGGGTGTTTCAGGGCCATGATATTTCCTGATGGAGGAGAAAGAAGAGAGACTCTCAGGCAAGAGGAAATCAAGAGACACTTCAAGCTATTCATATGGAGTTTATCTTTCTCCATTCCTGTATTTCTAGCCTCCATGGTCCTTATGCATATTCCAGGAATTAGTCATGTTTTAGATATGAAGGTGGTGAACAATTTAACTATTGGACTCATCGTAAGGTGGGAATTTTCGACCCCCGTACAGTTCTACATAGGAAGAAGATTCTACATTGGGGCTTACAAATCTTTGCGCAATGGTTCGGCTAACATGGATGTATTGATCGCCTTGGGAACAAACACGGCTTACTTCTATTCTGTTTATGTTGCAGTTAGAGCTGCTTTATCCAGAGACTTCATGGGCAGTGATTTTTTTGAGACCAGTTCTATGCTTATCTCATTTATTCTTTTAGGTAAGTATCTGGAAGTGTTGGCCAAGGGAAAGACATCACAAGCCATTGCCAAACTCATGGAATTGACTCCTGACACAGCAATATTGTTAAGTCTAAATGAGGAAGGCAATAATGTAACAAGTGAACAACAAATAGATAGCAGGTTGATACAAAAAGATGATGTGATAAAGATCGTACCTGGAGCCAAAGTAGCAGCAGACGGTTTTGTGATTTGGGGACAGAGTTACATAAATGAGAGCATGATAACGGGAGAAGCCAGGCCTGTGGCAAAGAGGAAAGGTGACATGGTTATTGGAGGCACTGTGAATGGCAATGGCGTCTTGCATGTGAAGGTGACAAGAGTTGGATCAGAGAGTGCTCTCTCGCAGATTGTTCGGCTTGTTGAATCAGCTCAGATGGCTAAAGCTCCGGTTCAGAAGCTAGCAGACCGAATTTCCAAATACTTTGTGCCAATGGTTATAATGCTTTCTCTAGCAACTTGGGTGTCCTGGTTCATAGCTGGACAATTACATGCGTACCCAGAATCTTGGATTCCATCCTCCATGAACAGCTTTGAACTTGCACTTCAGTTTGGGATCTCTGTGATGGTCATAGCCTGTCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTCATGGTTGGTACTGGAGTTGGTGCAACTCAAGGCGTGTTGATCAAAGGTGGCCAAGCATTAGAAAAGGCACATAAGGTGAATTGCATTGTCTTTGATAAGACGGGAACTCTCACAGTTGGGAAGCCAATCGTTGTTACCACAAAACTCTTCAAGAAGATAACTCTCCCAGATTTCTACAAATTTGTTGTTGCCATTGAGGTGAACAGTGAGCACCCAATAGCTAAGGCCATTGTTGAGCATGCTGAGAAAGCTGCAGAAGGGGATGAAAAGAACCCTACATGGCCAGAGGCACGTGACTTTGTTTCCATTTCAGGCCATGGAGTGAAGGCCATAGTTCAAGACAAGGAAATAATAGTTGGGAATAAGAAGTTGATGCAGGAACATAACATCGTCATTCCAGTGGATGCTGAAGAAACACTAGCAGAGGCTGAAAGGTTGGCACAAACTGGAATTCTAGTATCCATAGATAGAGAAATTGCAGGAGTTCTAGCAATATCTGACGCGTTGAAACCTAGTGCCAAAGAAGTCATTTCCATTCTTAACTCCATGAAAATCAAGAGCGTCCTCGCGACAGGCGATAACTGGGGAACTGCAAACTCCATTGCCAGACAAGTTGGGATTGAAACTGTCATAGCTGAAGCACAGCCTGAGGTTAAAGCAGACAAAGTAAAAGAATTGCAGACTTCTGGTTACACCGTGACAATGGTGGGAGACGGTATCAACGATTCGCCAGCGCTTGTGGCGGCTGATGTGGGAATGGCAATTGGTGCTGGCACAGATATTGCTATTGAGGCAGCTGACATAGTGCTCATGAAGAGCAACTTAGAAGACATAATAATTGCCATTGATCTTGCCAAGAAAACTTTCTCCAGGATTCGTCTAAACTACATTTGGGCTCTGGGATACAATCTGCTGGTAATTCCAATAGCTGCTGGAATCCTTTACCCATCTACTGAATTCCGGTTACCGCCATGGATCGCCGGAGCTGCAATGGCAGCATCTTCTGTCAGTGTTGTCTGCTCTTCCCTCTTGTTGAAGAACTACAGAAGACCCCAGAAGCTGAATAACCTGGGCTTAAATGGTATTAAGATTGAATAA 2979 0.4424 MLTEQNYWRCISNFNFQCCGNLSPEQHYPSMTRFPRGSSPEDVLSSPQGKAVFSVTGMTCAACAGSVEKAVKRLPGIRDAVVDVLNGKALVRYFPSMVTEERIREAIEDAGFEAKSIDEESIKEKPFQICRIHIKGMTCTSCSSTVESLLQAIPGVQKSQVALATEEAQVHYDPKIVTYNHLKEAIEEAGFEAILKSTGEHISKIELKIEGLKIDQSLREIHKSLQSLPGVENIDINQEMKKVSISYKPYMTGPRTFIEVIESSSGSGCFRAMIFPDGGERRETLRQEEIKRHFKLFIWSLSFSIPVFLASMVLMHIPGISHVLDMKVVNNLTIGLIVRWEFSTPVQFYIGRRFYIGAYKSLRNGSANMDVLIALGTNTAYFYSVYVAVRAALSRDFMGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMELTPDTAILLSLNEEGNNVTSEQQIDSRLIQKDDVIKIVPGAKVAADGFVIWGQSYINESMITGEARPVAKRKGDMVIGGTVNGNGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADRISKYFVPMVIMLSLATWVSWFIAGQLHAYPESWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALEKAHKVNCIVFDKTGTLTVGKPIVVTTKLFKKITLPDFYKFVVAIEVNSEHPIAKAIVEHAEKAAEGDEKNPTWPEARDFVSISGHGVKAIVQDKEIIVGNKKLMQEHNIVIPVDAEETLAEAERLAQTGILVSIDREIAGVLAISDALKPSAKEVISILNSMKIKSVLATGDNWGTANSIARQVGIETVIAEAQPEVKADKVKELQTSGYTVTMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNLLVIPIAAGILYPSTEFRLPPWIAGAAMAASSVSVVCSSLLLKNYRRPQKLNNLGLNGIKIE 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00615 992 Pfam E1-E2 ATPase 456 635 - -
Accr10g00615 992 FunFam Probable copper-transporting ATPase HMA5 771 920 - -
Accr10g00615 992 ProSiteProfiles Heavy-metal-associated domain profile. 49 115 IPR006121 GO:0046872
Accr10g00615 992 Pfam haloacid dehalogenase-like hydrolase 653 877 - -
Accr10g00615 992 SUPERFAMILY HMA, heavy metal-associated domain 49 120 IPR036163 GO:0046872
Accr10g00615 992 SUPERFAMILY HMA, heavy metal-associated domain 200 263 IPR036163 GO:0046872
Accr10g00615 992 ProSitePatterns Heavy-metal-associated domain. 134 163 IPR017969 GO:0046872
Accr10g00615 992 NCBIfam heavy metal translocating P-type ATPase 369 972 IPR027256 GO:0006812|GO:0016020|GO:0019829
Accr10g00615 992 ProSitePatterns Heavy-metal-associated domain. 55 84 IPR017969 GO:0046872
Accr10g00615 992 SFLD C1.7: P-type atpase like 639 914 - -
Accr10g00615 992 Gene3D - 424 547 - -
Accr10g00615 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 659 665 IPR018303 -
Accr10g00615 992 PRINTS Copper-transporting ATPase signature 354 373 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase signature 640 655 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase signature 406 425 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase signature 426 444 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase signature 840 857 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase signature 936 950 - -
Accr10g00615 992 NCBIfam HAD-IC family P-type ATPase 409 942 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr10g00615 992 SUPERFAMILY HMA, heavy metal-associated domain 126 200 IPR036163 GO:0046872
Accr10g00615 992 CDD HMA 52 115 IPR006121 GO:0046872
Accr10g00615 992 Pfam Heavy-metal-associated domain 132 192 IPR006121 GO:0046872
Accr10g00615 992 Pfam Heavy-metal-associated domain 52 113 IPR006121 GO:0046872
Accr10g00615 992 ProSiteProfiles Heavy-metal-associated domain profile. 128 194 IPR006121 GO:0046872
Accr10g00615 992 SUPERFAMILY HAD-like 656 969 IPR036412 -
Accr10g00615 992 FunFam Copper-transporting ATPase HMA5 48 119 - -
Accr10g00615 992 Gene3D - 204 267 - -
Accr10g00615 992 SUPERFAMILY Calcium ATPase, transduction domain A 457 543 IPR008250 -
Accr10g00615 992 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 19 984 - -
Accr10g00615 992 SFLD p-type atpase 639 914 IPR044492 -
Accr10g00615 992 FunFam Copper-transporting ATPase 1, putative 424 547 - -
Accr10g00615 992 Gene3D - 46 116 - -
Accr10g00615 992 CDD HMA 134 193 IPR006121 GO:0046872
Accr10g00615 992 Gene3D - 125 196 - -
Accr10g00615 992 NCBIfam copper ion binding protein 132 193 IPR006122 GO:0005507
Accr10g00615 992 NCBIfam copper ion binding protein 51 114 IPR006122 GO:0005507
Accr10g00615 992 FunFam Copper-transporting ATPase HMA5 128 198 - -
Accr10g00615 992 Gene3D - 624 920 IPR023214 -
Accr10g00615 992 Gene3D - 744 794 IPR023299 GO:0000166
Accr10g00615 992 Gene3D - 664 743 IPR023299 GO:0000166
Accr10g00615 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 406 648 IPR023298 -
Accr10g00615 992 CDD P-type_ATPase_Cu-like 297 959 - -
Accr10g00615 992 PRINTS P-type cation-transporting ATPase superfamily signature 657 671 - -
Accr10g00615 992 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Accr10g00615 992 PRINTS P-type cation-transporting ATPase superfamily signature 810 820 - -
Accr10g00615 992 PRINTS P-type cation-transporting ATPase superfamily signature 788 799 - -
Accr10g00615 992 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Accr10g00615 992 PRINTS P-type cation-transporting ATPase superfamily signature 886 898 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase 1 signature 152 173 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase 1 signature 50 75 - -
Accr10g00615 992 PRINTS Copper-transporting ATPase 1 signature 76 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00615 Accr-Chr10 12629792 12650050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00615 44 992 Primary Pumps ATPases AT1G63440 71.083 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00615 K17686 - gmx:100817431 1466.06