Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00607 ATGAGACAAGCAGGAGCATATTCAGGGCTACACTGTGGGGGAGTAACAGGGAGGATGGGGCCTCACGCGCTGCCATTAGCGAGGATAAAGAAGATAATGAAGAAATCGGGGGATGACGTCAAGATGATATCAGGTGAGGCTCCTATTGCTTTTGCCAAAGCTTGTGAGCTATTCATTGAAGAACTCACAAGAAGGTCTTGGCACATGACCACCCAGTCCAAGCGCCGGACCCTCCTCAAGGACGACGTGGCCTCCGCCATCATCGCCACCGATCTCTTCGACTTCCTCATCTCTTTGGTCACCCACCCTCACCACCACACTGATGATGATGCCTGTCCCTCTCCCTCTACCACCATTATGGAATCTCAAGACTCTCTTTAA 381 0.5171 MRQAGAYSGLHCGGVTGRMGPHALPLARIKKIMKKSGDDVKMISGEAPIAFAKACELFIEELTRRSWHMTTQSKRRTLLKDDVASAIIATDLFDFLISLVTHPHHHTDDDACPSPSTTIMESQDSL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00607 126 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 103 - -
Accr10g00607 126 FunFam Nuclear transcription factor Y subunit C 12 102 - -
Accr10g00607 126 Gene3D Histone, subunit A 15 102 IPR009072 GO:0046982
Accr10g00607 126 MobiDBLite consensus disorder prediction 106 126 - -
Accr10g00607 126 SUPERFAMILY Histone-fold 16 96 IPR009072 GO:0046982
Accr10g00607 126 MobiDBLite consensus disorder prediction 112 126 - -
Accr10g00607 126 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 87 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00607 Accr-Chr10 12243927 12244307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00607 22 100 CCAAT-HAP5 Transcription Factor Family AT1G54830 63.291 2.65e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr10g00607 CBFD_NFYB_HMF 1.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00607 - - adu:107462326 172.555