Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00578 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCGCCAAGGCATAGATTGAGGAGTGAAGCATCTGCACAGTTTCAAGCCAGCCATTTCCAGTTGCCTTCCATGAGCACTCAGAGACTGGACTTACCATGTAGTAGCTTCCCGCGCAAAGACAGCACCAACAGCTCGAGATCGCAGCCCTTGAGGCCCGTCGAGAAGAAGCAGGCCGTCGTCGTCGAGTCAAAACCGAAGCAGCCGCCGCCGAAGTGTTCTCTCAAACAGAACATCCGACTTCCACCATTGGCGACTCAGAGGAACGAGTTCTGGACTGAGAAAGGTAAGAGCTTGAAGAGGCTAGCCGAACAGGATGATGATGAATCCTTCACTATCAGAGCCAAGAGGACAAAGGGTATTATCAGTGACACCGAAAATCCCGATGTGGGTACTGCCGGCAACTTCTGGTTCAACAATCCTCCCATTCCTTTCTCTCTGACATGTTCAGGGGGAGAAGGAGAAGAAGAAAGGGTTTGTTTTGTGCCGTCTGAGGTTGTCTCTGCACCATGGGTGGATTCCATTGTTACGAAGATCACAGATATAGGCGAGAAAGAAGGCGCTGAGGGGAGCAATCTACCATCAAAGGAAGCTTCAGTATCCAACACTTCATCAGAAAGTCAAAGCTTGAGCCAGAGATTGAACGATAATGACTCAGAACAAGAAGTAGTCGGTAACGGAAGAAGACCAGGCAATCCTTATCACCATGACGGAACAGAGGTAGAAACAGGGGATGAAGAAAACCAAGAGGAGCATCGAGGGTTCGAGCTAGTGAGCCTACTTACAGCTTGTGTTGATGCTATTGGTTCAAGAAATGTTGCTGCAGTGAATTGTTTCATAGCAAAACTTGGTGATCTTGCTTCTCCAAGAGCAAGAACATCAATTAGCCGTGTCTGTGCTTATTTCACAGAAGCTTTAGCCATCCGGGTCACAAGAATTTGGCCTCACTTTTTTCACATTACAACACCTCGAGAGCTAGACAGGGTTGAAGATGAAGCTGGAACTGCATTAAGGCTTCTAAACCAGGTCAGCCCAATTCCAAAGTTTCTTCATTTCACGTCTAATGAGATTCTCTTGAGGGCTTTTGAAGGAAAAGACAGGGTTCACATCATAGACTTTGACATTAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGTCTAGCTTCAAGGACGAATCGACCAAGACATGTAAGAATCACTGGTATAGGAGAGTCCAAGCAAGAACTGAACGAAACAGGGGATAGACTTGCTGGTTTTGCTCAAGCCTTGAACCTTCCCTTTGAGTTCCACCCTGTGGTTGATAGGCTAGAAGATGTGAGGTTATGGATGCTTCATGTGAAGGAACATGAAAGTGTAGCTGTGAATTGCATTTCTCAGCTGCACAAAACACTCTACGATGTTTCTGGAGGAGCATTAAGGGATTTTCTAGGCCTAATCCGAAGCACAAATCCTTGCATAGTTCTCATGGCAGAGCAAGAAGCAGAGCACAATGGGGTTAGACTTGAAACCAGAGTATGCAATTCGTTAAAGTATTACTCTGCTCTGTTTGATTCGATTGACCATTGTCTTCCACAAGAAAGTCCAGTGAGAAACAAGATAGAGGAGATGTTTGCTTGGGAGATAAGGAACATAATTGCTTGTGAAGGAAGGGAAAGGGTTGAGAGGCACGAGAATTTTCAGAAATGGAGGAAGGTGATGATGGAGCAAGGAGGGTTTAGAAGCTATGGGATTAGTGACAGAGAAGTGAATCAGAGTCAGATGTTGCTGAAGATGTATGCTTGTGAAGATTATAATGTGAAGAAGAAGGAGGAGGAAGAAGCTGAAGCTATCACACTGAGTTGGCTTGAGCAGCCTCTTTACACAGTGTCAGCGTGGGCCCCACTTGATGCAGCAGGAGCAGTAACTGGAAGCCCATCTTCTTATTCTCAGCCATGA 1968 0.4604 MLAGCSSSTLLSPRHRLRSEASAQFQASHFQLPSMSTQRLDLPCSSFPRKDSTNSSRSQPLRPVEKKQAVVVESKPKQPPPKCSLKQNIRLPPLATQRNEFWTEKGKSLKRLAEQDDDESFTIRAKRTKGIISDTENPDVGTAGNFWFNNPPIPFSLTCSGGEGEEERVCFVPSEVVSAPWVDSIVTKITDIGEKEGAEGSNLPSKEASVSNTSSESQSLSQRLNDNDSEQEVVGNGRRPGNPYHHDGTEVETGDEENQEEHRGFELVSLLTACVDAIGSRNVAAVNCFIAKLGDLASPRARTSISRVCAYFTEALAIRVTRIWPHFFHITTPRELDRVEDEAGTALRLLNQVSPIPKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNRPRHVRITGIGESKQELNETGDRLAGFAQALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCISQLHKTLYDVSGGALRDFLGLIRSTNPCIVLMAEQEAEHNGVRLETRVCNSLKYYSALFDSIDHCLPQESPVRNKIEEMFAWEIRNIIACEGRERVERHENFQKWRKVMMEQGGFRSYGISDREVNQSQMLLKMYACEDYNVKKKEEEEAEAITLSWLEQPLYTVSAWAPLDAAGAVTGSPSSYSQP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00578 655 MobiDBLite consensus disorder prediction 243 261 - -
Accr10g00578 655 MobiDBLite consensus disorder prediction 42 87 - -
Accr10g00578 655 Pfam GRAS domain family 267 636 IPR005202 -
Accr10g00578 655 MobiDBLite consensus disorder prediction 196 261 - -
Accr10g00578 655 MobiDBLite consensus disorder prediction 204 231 - -
Accr10g00578 655 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 632 IPR005202 -
Accr10g00578 655 ProSiteProfiles GRAS family profile. 258 637 IPR005202 -
Accr10g00578 655 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00578 Accr-Chr10 10945943 10947910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00578 1 636 GRAS Transcription Factor Family AT1G63100 58.493 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr10g00578 GRAS 1.4e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00578 - - cave:132174862 874.389