Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00576 ATGGCCCTTGATGTTGCCAAAGGCATGAATTACCTTCATCACAGAAATCCACCAATTGTACATAGAGACTTGAAGTCTTCTAACCTACTTGTCGATAAAAACTGGACAGTTAAGGTTGGAGACTTTGGCTTGTCAAGGTTGAAAGATGGAACTTTCTTGAATTCAATATCTGGAAGAGGCACTCCTCAGTGGATGGCTCCTGAAGTCCTTCGAAACGAACCTTCAAATGAAAAGTGTGATGTGTTCAGTTTTGGCGTCATCCTTTGGGAGCTAATGACCCAATCTGTTCCATGGAATAACTTGAACTCCGTCCAGGTTGTTGGAGTGGTGGGCTTTATGGATAGAAGACTGGACCTGCCGGAGGGAATTGATCCCCACTTAGCAAATATCATCCGTGACTGCTGGCACAGTGATCCAGAGCAACGCCCCTCATTTGAAGAGCTAATACAGAGAATGATGTCACTTATCAGCAGAGTAACTGCCATGTCCGTTAAGAGGATTTCCGCATCCTAA 513 0.4464 MALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDGTFLNSISGRGTPQWMAPEVLRNEPSNEKCDVFSFGVILWELMTQSVPWNNLNSVQVVGVVGFMDRRLDLPEGIDPHLANIIRDCWHSDPEQRPSFEELIQRMMSLISRVTAMSVKRISAS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00576 170 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Accr10g00576 170 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00576 170 PRINTS Tyrosine kinase catalytic domain signature 13 31 IPR001245 GO:0004672|GO:0006468
Accr10g00576 170 PRINTS Tyrosine kinase catalytic domain signature 79 101 IPR001245 GO:0004672|GO:0006468
Accr10g00576 170 PRINTS Tyrosine kinase catalytic domain signature 123 145 IPR001245 GO:0004672|GO:0006468
Accr10g00576 170 PRINTS Tyrosine kinase catalytic domain signature 60 70 IPR001245 GO:0004672|GO:0006468
Accr10g00576 170 SMART serkin_6 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00576 170 FunFam PAS domain-containing protein tyrosine kinase family protein 1 168 - -
Accr10g00576 170 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Accr10g00576 170 Gene3D Transferase(Phosphotransferase) domain 1 1 165 - -
Accr10g00576 170 Pfam Protein tyrosine and serine/threonine kinase 1 151 IPR001245 GO:0004672|GO:0006468
Accr10g00576 170 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00576 Accr-Chr10 10912581 10914506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00576 1 158 MAP Kinase Kinase Kinase AT4G23050 79.747 1.31e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Accr10g00576 PK_Tyr_Ser-Thr 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00576 - - gmx:100813707 308.145