Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00575 ATGGGCAGGGCATCCAAATGGTTTCGCTCTGTTTTTGGTCTCAAGAAGTCATCAGAGTCCTCATCTTCACCGTCACCGTCGTCGACATTACCACCTGGCTCAGCTTCAAAGCCACCCAAAGACAAACGCCGGTGGAGCTTCGTCAAGTCTTACAGAGAATCCGGTACTGCTAAAACCTCCGACGTCCACCACACAGCGTTCAGAGATGAAGCGGTACAGTCATCCGGACACATCCACGGCGTGTGCCCTGAGAAGCACGCAATGACGGTTGCAGCTGCCAAAGCTGCTGTGGCGGAAGCCGCAGTCGCTGCTGCTCAGGCCGCTGCCGCCGTTGTCAGGCTTACAAACAGCGGCAGTTTCCCTGGGAGCATCGGGATTCGTGAGGAATGGGCGGCCATCAAGATTCAGGCCGCTTTCCGAGGCTGTTTGGCAAGGAGGGCATTACGGGCATTAAGAGGATTAGTGAAGCTTCAGGCGTTGGTGAGAGGTCATATTGATAGGAAGCGAACAGCAGAATGGTTGCATAGAGTACATGCTCTTGTTCGAGTACAAGCACGTGTTCGTGCTGGGCGAGCTCAAATTCTGCAGACGCCATTTTCATATTCCAAGTCATCTAAAGCAGACTTCCATGGTCCAGCAACGCCAGACCAATTTGAAAGCCCGATCAGGTCCAAGAGCATGAAATTTGATCATTCATCATCACTCAAGAGAAATGTATCCAAGTCCCATTTTCAGGTACATGGGAATCAAGACAAATGTTGGGACGATGATAAAAGCGACAGGATTCTCGAGATTGATTCTGGGAAACAACACTTCACGCCGAAACGCCGGAACCTCTTTCACACCATTAACTATCCTTCAGTAAGCGATAATCACAGCCAAAGTTTCTCTACTGCAAAGGATTCAGTAAGTCATCAATCAGGTCACAGCATGTCTTCATTCGACGAAGGCGTCGTGGATGGTCCTCAACTCTTTTCTGTCTTCTCAAAAGACTATGGCTTCAAAACTAGTCCTTTGACTCCGAGCAGAAGCGACGACTCAAGAAGCCATCTGAGTTCTTATTCTGACTACCCAAGCTACATGGCTTACACTGAATCTTCAAAGGCAAAAGTCAGGTCACTGAGTGCTCCAAAGCAAAGGCCTCAACAATATGAGAGGTCTAGTTCAGCTAATGGGTACTCAGTTCAAGGATTTGGTGAATCAAGATTGGCCACCCACAAATCAAATGCATTGCATGCAAACTTCACTACCAAAGCCTATCCGGGTTCTGGTCGTTTGGACAAGTATGGTATGCCCGTGGGATATAAATACTGA 1314 0.4871 MGRASKWFRSVFGLKKSSESSSSPSPSSTLPPGSASKPPKDKRRWSFVKSYRESGTAKTSDVHHTAFRDEAVQSSGHIHGVCPEKHAMTVAAAKAAVAEAAVAAAQAAAAVVRLTNSGSFPGSIGIREEWAAIKIQAAFRGCLARRALRALRGLVKLQALVRGHIDRKRTAEWLHRVHALVRVQARVRAGRAQILQTPFSYSKSSKADFHGPATPDQFESPIRSKSMKFDHSSSLKRNVSKSHFQVHGNQDKCWDDDKSDRILEIDSGKQHFTPKRRNLFHTINYPSVSDNHSQSFSTAKDSVSHQSGHSMSSFDEGVVDGPQLFSVFSKDYGFKTSPLTPSRSDDSRSHLSSYSDYPSYMAYTESSKAKVRSLSAPKQRPQQYERSSSANGYSVQGFGESRLATHKSNALHANFTTKAYPGSGRLDKYGMPVGYKY 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00575 437 MobiDBLite consensus disorder prediction 291 315 - -
Accr10g00575 437 Pfam Protein of unknown function (DUF4005) 340 389 IPR025064 -
Accr10g00575 437 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Accr10g00575 437 MobiDBLite consensus disorder prediction 291 313 - -
Accr10g00575 437 MobiDBLite consensus disorder prediction 14 44 - -
Accr10g00575 437 SMART iq_5 150 171 IPR000048 GO:0005515
Accr10g00575 437 SMART iq_5 127 149 IPR000048 GO:0005515
Accr10g00575 437 MobiDBLite consensus disorder prediction 369 393 - -
Accr10g00575 437 MobiDBLite consensus disorder prediction 14 30 - -
Accr10g00575 437 Gene3D - 128 171 - -
Accr10g00575 437 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Accr10g00575 437 PANTHER IQ-DOMAIN 5-RELATED 1 389 - -
Accr10g00575 437 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Accr10g00575 437 Pfam IQ calmodulin-binding motif 155 169 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00575 Accr-Chr10 10881302 10885874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00575 129 437 IQD Protein Family AT4G23060 44.512 3.03e-60 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00575 - - pcin:129310994 570.466