Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00570 ATGGCTTCATCTTCTTGTTCCAAGAGGCACCCTTTGTACCGTGGAATCCGGTGCCGGGGAGAAAAATGGGTGTCGGAGATCCGGGAGCCCCGTAAGCCATCGCGTATATGGCTGGGGACATTTCCGACGCCGGAGATGGCGGCGGCTGCTTATGATGTGGCGGCGTTGGCTCTAAAGGGCAAGGATGCGGATCTCAACTTGCCTGAGTTTGCTGGGCGGTATCCCGTGCCGCTTTCTACCTCGGCTCCTCATATTCGTAGCGCTGCCACCGCAGCCGCTTCTCTAGTGAACGTTGAAGCCATTTCCACCACTAGTGCTACACATAAACACATTAATGCTTCTTCGTCTTCTGCCTCTTCTTCATTTGTTGATGAATGTTACAATAATAATGACAGGGCCATCTCAATCTCATCGACCTGGTCTGGTACAGAAGATCATCAGTTTGTGGACGAGGATGCCATTTTCGGTATGCCTAGTTTGCTCCTAGAAATGGCTGAAGGAATGTTGCTGTCCCCTCCCAGAATCACACCTCCAGCACCCTCAGACAATTTTCCTGCTGAATGTTTGTGGAACTACTTTTGA 582 0.5103 MASSSCSKRHPLYRGIRCRGEKWVSEIREPRKPSRIWLGTFPTPEMAAAAYDVAALALKGKDADLNLPEFAGRYPVPLSTSAPHIRSAATAAASLVNVEAISTTSATHKHINASSSSASSSFVDECYNNNDRAISISSTWSGTEDHQFVDEDAIFGMPSLLLEMAEGMLLSPPRITPPAPSDNFPAECLWNYF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00570 193 SUPERFAMILY DNA-binding domain 12 68 IPR016177 GO:0003677
Accr10g00570 193 ProSiteProfiles AP2/ERF domain profile. 12 68 IPR001471 GO:0003700|GO:0006355
Accr10g00570 193 Pfam AP2 domain 11 60 IPR001471 GO:0003700|GO:0006355
Accr10g00570 193 CDD AP2 11 69 IPR001471 GO:0003700|GO:0006355
Accr10g00570 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 165 - -
Accr10g00570 193 Gene3D AP2/ERF domain 12 69 IPR036955 GO:0003700|GO:0006355
Accr10g00570 193 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00570 Accr-Chr10 10550178 10550759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00570 3 192 AP2-EREBP Transcription Factor Family AT2G36450 46.701 1.22e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00570 AP2 5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00570 - - pcin:129310751 238.424