Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00568 ATGGACTATTTCAGACAACACGCACTTGACGCTTCTTCTGCATCTTCGTCGGAGGTGACCTCGTCCAGCGGAGAACCGATATTGTTTCTGGCGTCAGAGCGACCCAAGAAGCCAGCGGGACGTAGGGTTTTCAAGGAGACTAGGCATCCCGTTTACAGGGGAGTGCGACGGAGAAACAACGACAAGTGGGTGAGCGAGGTTCGTGTGCCGAACGGCAACACCAGGATTTGGCTCGGAACATATTCCACGGCACAGATGGCAGCTCGTGCTTATGACTTGGCAGCACTTGCTCTTCGTCGTGGCAAGTCGGCTTGCCTGAATTTCGCGGACTCCGCTTGGCGGTTGCCCGTGCCGGAGTCAACCAATGCGGCGGAGATCAGGCGGGTGGCGGCTCTGGCTGCTGAGGAATTCGGCCGGAGTATGGATGATTCTGAGCTTTGCAGTCGCTGTAGTGACCTGGTCAACGACGATGTCATCGGAGATGCTTCGAATGTACAGGATTATTGTGAAGAAGAAGCAACGTACATTAATCAAGCTCCGGCAGTGTCCACGACGGAGTTCGACGAGCTCCCTCATTTGCTAGTGAGCATTGCGGAGGAGCCTCTCCGATCGCCACCCTCTATTTGGCCATATGGTTGGAGCTGGAATGACGTGGATGTTGATACTGAGGTCTCACTGTGGCAGTATTGA 690 0.5478 MDYFRQHALDASSASSSEVTSSSGEPILFLASERPKKPAGRRVFKETRHPVYRGVRRRNNDKWVSEVRVPNGNTRIWLGTYSTAQMAARAYDLAALALRRGKSACLNFADSAWRLPVPESTNAAEIRRVAALAAEEFGRSMDDSELCSRCSDLVNDDVIGDASNVQDYCEEEATYINQAPAVSTTEFDELPHLLVSIAEEPLRSPPSIWPYGWSWNDVDVDTEVSLWQY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00568 229 MobiDBLite consensus disorder prediction 1 21 - -
Accr10g00568 229 SMART rav1_2 51 115 IPR001471 GO:0003700|GO:0006355
Accr10g00568 229 CDD AP2 52 111 IPR001471 GO:0003700|GO:0006355
Accr10g00568 229 Pfam AP2 domain 50 100 IPR001471 GO:0003700|GO:0006355
Accr10g00568 229 SUPERFAMILY DNA-binding domain 51 111 IPR016177 GO:0003677
Accr10g00568 229 Gene3D AP2/ERF domain 51 110 IPR036955 GO:0003700|GO:0006355
Accr10g00568 229 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Accr10g00568 229 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Accr10g00568 229 ProSiteProfiles AP2/ERF domain profile. 51 109 IPR001471 GO:0003700|GO:0006355
Accr10g00568 229 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 229 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00568 Accr-Chr10 10435607 10436296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00568 20 229 AP2-EREBP Transcription Factor Family AT4G25480 50.000 3.85e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00568 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00568 - - pcin:129312011 238.424