Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00560 ATGGCTCATTTTAATTTTTGTGAAACGCTATCCTTTGGAGGTTCAAACCATGGACTGGCTCACCTAATTGTTCCGTTTAAAACCACTACGAACTCCTCCCTAAGGGTCTTGCTTCTCCATGGAAACTTAGAAATATGCGTGAAAGATGCCAGAAACCTGCCCAATTTAGACATGTTCCATCAGAAAGTAGGGGATATGTTTTCCAGATTACCTGGAAAACTTGGCCAAAATATTCAAGGGCATATGTCCAATTCAATTATTACTAGTGATCCCTACGTGACTGTGTCTCTGGCTGGTGCTGTAATTGCAAGAACATTTGTGTTCAATAACGACGAGAACCCTAGCTGGATGCAGCATTTCAATGTTCCCGTCGCACATTATGCTGCAGAAGTACATTTCGTGGTAAAGGACAACGATATTGTGGGCTCACAAATCATGGGTGCGGTTGGAATTCCAGTAGAACAGTTATTCCAAGGCACAAAAGTTGAAGGGTCCTTTCCAATCCTCAATTCTAGTGGGAAACCTTGCAAAGATGGAGCAGTCTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTGGCTCTTTCCGGTCATGGAATAGGAGCAGGCCCTAGTTATGAAGGTGTTCCAGGTACATACTTTCCCCTTAGGAAGGGCGGTCGAGTTAGACTTTATCAGGACGCTCATGTTCATAGAGGTAGTCTTCTTCCTTGTTTGAAGATGGAAGGTGGTGTGAGTTATGAGCATGGTAATTGTTGGCGCGACATCTTTGATTCAATAAGTCAGGCGCGACGTTTAGTATACATAGTGGGGTGGTCTGTGCACTACAATGTTAGACTGATTCGTGATGCTGATGATGATGCTAAAGCTTGCACTTTAGGTGATCTTCTCAAAATCAAATCACAGGAAGGTGTGAGAGTGCTGCTTCTTGTGTGGGACGATCCTACTTCCAGAAGCATGATAGGTGGATGCAAAACGACTGGACTTATGAACACTCATGATGAGGACACGCGCCAGTTTTTCAAGGGCTCTTCAGTGCAAGTTCTGCTTTGCCCACGTTCAAGTGGAAAAGGACATAGTTGGGTCAAACAACAGGAAGCTGGAACCATCTATACTCATCATCAGAAAACAGTCATTGTGGATGCTGATGCAGGCCATCATAAAAGAAAGATTATATCTTTTATTGGAGGTCTTGATTTATGTGATGGCAGATATGATACTCCACAACATCCTCTCTTCAGTACGCTGCAGACAACACACAAAGATGACTATCATAACCCCAACTTTGTGGGTCCTGTTGATGGTTGTCCAAGACAACCGTGGCATGATTTGCACTCACTAATAGACGGTCCAGCTGCTTATGACATACTCACCAATTTTGAGGATCGTTGGTTAAAGGCATCAAAATTGCATGGACTTAAGAAGATAAAAGGCTCACATGACGATTCATTACTTAAAATTGATAGAATCCCTGATATCCTTGGTATTGCTGATGTTTCAAGCTCGAATGATGATAACCCAGAAGCTTGGCATGTCCAGGTCTTTCGTTCAATTGATTCCAACTCTGTCAAAGGATTTCCCAAGGATCCTAAAGATGCTGTAAAAAAGAACTTGGTTTGTGGAAAGAATATACTGATAGACATGAGCATACATTCTGCATATGTCAAGGCTATCAGATCTGCCCAAAAATTCATCTATATTGAGAACCAATACTTCCTTGGCTCGTCATATAATTGGGATTCTCAGAAAGACATAGGTGCAAACAATTTAATTCCAATGGAAATTGCTCTCAAAATAGCTGCCAAAATCAAACAACGTGAGAGATTTGCTGCTTATATTCTCATTCCTATGTGGCCTGAAGGTGTACCAACAAGTAAACCTACTCAAAGGATTCTCTTCTGGCAGTTTAAAACAATGCAAATGATGTACGAGACAGTTTATAAGGCCTTACAAGAGGCTGGACTTGACAATGAGTATGAACCGCAGGACTACTTGAATTTCTTTTGCCTTGGCAATCGTGAGGCCCCAGAAAACCAGATTATTGTAAATGCTAGAAATCTTGCTGGGGCAAACACTGCTCAACCTCAGGCACAAACACTAACCCAAAGGAACAGGCGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAGTATGTGATACTGGGATCTGCAAACATTAACCAAAGATCCATGGAAGGAACCAGAGACACAGAGATAGCAATGGGTGCTTATCAGCCTTATTATACTTGGGCAAGCAAGCGCTCTAGACCTCATGGACAGGTGTATGGATATAGAATGTCACTGTGGGGTGAACATATTGGAAGCATTGAGGAGTGTATGAAGGAAGCAGAGAGTGTTGAGTGCGTGAGACGGGTGAGGCACTTGGGTGAGCAAAACTGGAGACAGTACATAGCTGAAGAGGTAAGAGACATGAAGGGTCATTTATTGAAATACCCACTTGAAGTTGATTCAATGGGGAAAGTGAAGCCTCTTCCTGGCTGTGAGACATTTCCTGATGTTGGTGGAAACATCAAGGGCACTTTTATTCCCATTCAAGAAAATCTCACCATCTGA 2589 0.4222 MAHFNFCETLSFGGSNHGLAHLIVPFKTTTNSSLRVLLLHGNLEICVKDARNLPNLDMFHQKVGDMFSRLPGKLGQNIQGHMSNSIITSDPYVTVSLAGAVIARTFVFNNDENPSWMQHFNVPVAHYAAEVHFVVKDNDIVGSQIMGAVGIPVEQLFQGTKVEGSFPILNSSGKPCKDGAVLSLSIQYIPFDKVALSGHGIGAGPSYEGVPGTYFPLRKGGRVRLYQDAHVHRGSLLPCLKMEGGVSYEHGNCWRDIFDSISQARRLVYIVGWSVHYNVRLIRDADDDAKACTLGDLLKIKSQEGVRVLLLVWDDPTSRSMIGGCKTTGLMNTHDEDTRQFFKGSSVQVLLCPRSSGKGHSWVKQQEAGTIYTHHQKTVIVDADAGHHKRKIISFIGGLDLCDGRYDTPQHPLFSTLQTTHKDDYHNPNFVGPVDGCPRQPWHDLHSLIDGPAAYDILTNFEDRWLKASKLHGLKKIKGSHDDSLLKIDRIPDILGIADVSSSNDDNPEAWHVQVFRSIDSNSVKGFPKDPKDAVKKNLVCGKNILIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSQKDIGANNLIPMEIALKIAAKIKQRERFAAYILIPMWPEGVPTSKPTQRILFWQFKTMQMMYETVYKALQEAGLDNEYEPQDYLNFFCLGNREAPENQIIVNARNLAGANTAQPQAQTLTQRNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPYYTWASKRSRPHGQVYGYRMSLWGEHIGSIEECMKEAESVECVRRVRHLGEQNWRQYIAEEVRDMKGHLLKYPLEVDSMGKVKPLPGCETFPDVGGNIKGTFIPIQENLTI 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00560 862 Gene3D C2 domain 23 189 IPR035892 -
Accr10g00560 862 ProSiteProfiles C2 domain profile. 24 166 IPR000008 -
Accr10g00560 862 Pfam C2 domain 41 168 IPR000008 -
Accr10g00560 862 Gene3D Endonuclease Chain A 502 758 - -
Accr10g00560 862 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 34 191 IPR035892 -
Accr10g00560 862 SUPERFAMILY Phospholipase D/nuclease 208 470 - -
Accr10g00560 862 PIRSF PLD_plant 28 862 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Accr10g00560 862 SUPERFAMILY Phospholipase D/nuclease 551 751 - -
Accr10g00560 862 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 370 405 IPR001736 GO:0003824
Accr10g00560 862 CDD C2_plant_PLD 36 189 - -
Accr10g00560 862 SMART C2_3c 42 165 IPR000008 -
Accr10g00560 862 Pfam Phospholipase D C terminal 782 852 IPR024632 -
Accr10g00560 862 SMART pld_4 370 405 IPR001736 GO:0003824
Accr10g00560 862 SMART pld_4 708 735 IPR001736 GO:0003824
Accr10g00560 862 Pfam Phospholipase D Active site motif 709 735 IPR001736 GO:0003824
Accr10g00560 862 Pfam Phospholipase D Active site motif 371 405 IPR001736 GO:0003824
Accr10g00560 862 PANTHER PHOSPHOLIPASE D 33 851 IPR015679 -
Accr10g00560 862 FunFam Phospholipase D 518 754 - -
Accr10g00560 862 Gene3D Endonuclease Chain A 242 485 - -
Accr10g00560 862 FunFam Phospholipase D delta 244 484 - -
Accr10g00560 862 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 708 735 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00560 Accr-Chr10 10203293 10208345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00560 33 862 Phospholipase D Gene Family (Wang group) AT2G42010 69.637 0.0 1267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00560 K01115 - gmx:100786241 1367.83