Gene search


Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00559 288 SMART KNOX1_2 25 69 IPR005540 GO:0003677|GO:0005634
Accr10g00559 288 Pfam KNOX1 domain 27 68 IPR005540 GO:0003677|GO:0005634
Accr10g00559 288 Pfam KNOX2 domain 84 134 IPR005541 GO:0003677|GO:0005634
Accr10g00559 288 CDD homeodomain 214 275 IPR001356 GO:0003677
Accr10g00559 288 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 28 274 - -
Accr10g00559 288 SUPERFAMILY Homeodomain-like 213 278 IPR009057 -
Accr10g00559 288 SMART HOX_1 213 278 IPR001356 GO:0003677
Accr10g00559 288 FunFam homeobox protein knotted-1-like 3 isoform X1 212 273 - -
Accr10g00559 288 Gene3D - 210 284 - -
Accr10g00559 288 Pfam Homeobox KN domain 231 270 IPR008422 GO:0003677|GO:0006355
Accr10g00559 288 ProSiteProfiles 'Homeobox' domain profile. 211 274 IPR001356 GO:0003677
Accr10g00559 288 ProSiteProfiles ELK domain profile. 191 211 IPR005539 GO:0003677
Accr10g00559 288 SMART KNOX2_2 80 135 IPR005541 GO:0003677|GO:0005634
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr10g00559 Accr-Chr10 10190364 10195272 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00559 1 287 Homeobox Transcription Factor Family AT1G62990 79.452 8.90e-172 475
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Accr10g00559 KNOX2 6.4e-18 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00559 - - qsu:111989291 494.582