LGRPv2

Gene search

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g00559	288	SMART	KNOX1_2	25	69	IPR005540	GO:0003677\|GO:0005634
	Accr10g00559	288	Pfam	KNOX1 domain	27	68	IPR005540	GO:0003677\|GO:0005634
	Accr10g00559	288	Pfam	KNOX2 domain	84	134	IPR005541	GO:0003677\|GO:0005634
	Accr10g00559	288	CDD	homeodomain	214	275	IPR001356	GO:0003677
	Accr10g00559	288	PANTHER	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	28	274	-	-
	Accr10g00559	288	SUPERFAMILY	Homeodomain-like	213	278	IPR009057	-
	Accr10g00559	288	SMART	HOX_1	213	278	IPR001356	GO:0003677
	Accr10g00559	288	FunFam	homeobox protein knotted-1-like 3 isoform X1	212	273	-	-
	Accr10g00559	288	Gene3D	-	210	284	-	-
	Accr10g00559	288	Pfam	Homeobox KN domain	231	270	IPR008422	GO:0003677\|GO:0006355
	Accr10g00559	288	ProSiteProfiles	'Homeobox' domain profile.	211	274	IPR001356	GO:0003677
	Accr10g00559	288	ProSiteProfiles	ELK domain profile.	191	211	IPR005539	GO:0003677
	Accr10g00559	288	SMART	KNOX2_2	80	135	IPR005541	GO:0003677\|GO:0005634

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g00559	Accr-Chr10	10190364	10195272	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g00559	1	287	Homeobox Transcription Factor Family	AT1G62990	79.452	8.90e-172	475

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-KNOX	Accr10g00559		KNOX2	6.4e-18	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g00559	-		-	qsu:111989291	494.582