Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00545 ATGGAAATGACAATGGTGGCAAGTGTTGAAGCCAGAAGAAGCCTCTGGCGTATCCTAAAAAACGGCACTCATTGTTTTTCAACGCTTTCCAGTTCTATCGACCCCTTTCATCCAAAATTATCCCAGCAATCTCAGTACAGGAAAGAGATTTCACTTGCCAGTCTCTTCCAAAGGTACGGGCTCCCACCATCACAGATTCAAGGTTTTCTTGCAAAGAATCGTTTTCTCTTGAATTCTAGTTTAAAGGAGTTAGAGAAGTGTCTGGCTACTCTACTAGCATTCAGGATTCCTCAAAACTCTCTCATTTCTTTGATACGTGATTGTCCTGGGATATTGGAACATCAGTTTCTCAAGAAATGGCAAGCTTTTTTCTCACAACTGCACGGTTTAACCCCTTCCCCACTTATGATCAGAAATTTTTTGCAATACTCTAGGAGGTATCAGCTAGACCCTGGTGAACTTTCAAAAAGCATTGAGATCTTGAGGGGTTTAGGCTTTACTCATGTTTCTATAGCTCGGGTTTTTGAGGACTTTCCTACTGTGGCCGTGATGAATAAGGGAGAAATTCTTTCTATAATCGAATTTCTCATGGAAATTGGGGTTCCCAGGGACAAGATTGATCGAGTCATAAGTTTGCATCCTAGAGTTTTGGGACTTGGGATTGAGGACCGGTTGAAGCCGTTGCTCTGTGAATTGAGCAATTCAGGATTTTCTGATGATGAGATTATAAAAGAGATAATCAGGGAGCCCAATATTTTGGGAATGGAACTTGGGGAATTTTCACGATGTTTACAATTGCTCAAGACTTTGAAATGTAGAGAAGCGATCAAAGAGAAGATTTTCCAAGAGGGTATGCTGAGAGCTGGTTTTGAAGTAAAATTGAGAGTGGATTGCTTGTGCAGTCATGGTTTAATTCGTAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCGAGGTTGATTACATATGACTTAGAGAACATTGAAAAGAAGATTGACTTCTTAGTGCACAGGATGGAATATAGCGTTGATTGTTTACCTGATGTTCCAGAATATTTGGGTGTAAATTTCGAAAAGCAGATTGTTCCTAGACACTCTGTGATGGGATATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGATTTGATTAAGCCAAGTAGACTTAGATTTTACAATCTATATGTCAAACCCTACCCAGAATGTGAAAAATTGTACGGGAGATTTTCAGGAAATGTTGAAGTTAAGCGCAAGCATCCAACAGGACTCTGGAAAATCTTTAAACCACGAAAGTTCCCTGAAACCGATGAAGATGTGAAGAACATGAAGTCCTTTATGGACGGAGTAGTGTAG 1359 0.4003 MEMTMVASVEARRSLWRILKNGTHCFSTLSSSIDPFHPKLSQQSQYRKEISLASLFQRYGLPPSQIQGFLAKNRFLLNSSLKELEKCLATLLAFRIPQNSLISLIRDCPGILEHQFLKKWQAFFSQLHGLTPSPLMIRNFLQYSRRYQLDPGELSKSIEILRGLGFTHVSIARVFEDFPTVAVMNKGEILSIIEFLMEIGVPRDKIDRVISLHPRVLGLGIEDRLKPLLCELSNSGFSDDEIIKEIIREPNILGMELGEFSRCLQLLKTLKCREAIKEKIFQEGMLRAGFEVKLRVDCLCSHGLIRRDAFKVLWKEPRLITYDLENIEKKIDFLVHRMEYSVDCLPDVPEYLGVNFEKQIVPRHSVMGYLKAKGAIDFEVRLKDLIKPSRLRFYNLYVKPYPECEKLYGRFSGNVEVKRKHPTGLWKIFKPRKFPETDEDVKNMKSFMDGVV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00545 452 Pfam mTERF 187 393 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 Pfam mTERF 143 261 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 243 273 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 67 97 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 342 376 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 310 341 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 SMART mt_12 137 167 IPR003690 GO:0003690|GO:0006355
Accr10g00545 452 Gene3D Transcription termination factor 3, mitochondrial 186 411 IPR038538 -
Accr10g00545 452 PANTHER CGI-12 PROTEIN-RELATED 150 401 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr10g00545 mTERF 6.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00545 - - pcin:129319850 814.298