Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00535 ATGAAAGGGGTCAGTCAAATTCCCCTCTTTGTTCATCACGTTCTTCTGTTTGCTGCTCTTTTACCACTTTCCTCTCTCAAAGTCTCATCATCACCAGAATCTGAGAAGGAAATTCTGCTTGAATTGAAGGGAAATATTACCGATGACCCCCATAATAGCTTGAGTTCATGGGTATCAAGTGGAAACCCATGTGAAGATTACATGGGTATTTCTTGTAATTCACAAGGATTTGTAGAAAAAATTGTTCTTTGGAACACTAGCTTAGCTGGAGTTTTGTCCCCAGCATTGTCCAGGCTCAAGTTGTTGAAGGTTTTGACACTGTACGGGAATCATTTTTCTGGTAAAATCCCAGAAGAATATGCCGAGTTTCAATCAGTATGGAAGATCAATTTGAGCTCTAATGCCTTATCTGGTCCAATCCCAGAATTCATAGGTAATATAAAGAGCTTACGTTTTCTTGATTTGTCACTAAATGGCTTCTCTGGAGATATACCATCAGCTTTGTTTAAATACTGCTACAAAACCAAGTTCCTTTCTTTTTCTCATAACAATCTTTCAGGTTCAATTCCAGCTTCCATAGTGAATTGCTTGAACCTTGAAGGTTTTGATTTTTCCTTCAACAATCTCACTGGGAATATTCCTTCAAGACTTTGTGATATTCCAATGTTGTCCTATGCATCACTAAGGAACAATGCCTTGTCAGGGACAGAGCAAGATCAAATTTTCTCAGAATGTCACAGTTTGGTATATATAAATCTTGCTAGTAACATGTTCAGTGGTTCTGCTCCATTCAACATCCTTGAAATGAAAAATCTTACTTATTTCAATATATCATATAATAGATTCAGTGGACATATTCCTGAGATGAGTTCATGTAGTGAGATATTGGAAGTTTTGGATGCTTCAGGTAATGATTTGGAAGGGGAGATTCCAATGAGCATAACAAGATGCAAGAAGCTCAAGCTTTTGGCCTTGGAGGTAAATAGGCTTATAGGGACTATCCCATTAAGGATTCAAGAATTGAAGAGTCTATTAATTGTTAAACTGGGTGATAACTCCATTGGTGGAACCATTCCTAAGGATTTTGGTAACATTGAACTGCTTGAGATTCTGGATCTACAGAATCTAAACCTCATTGGTAAAATTCCAAATGATGTATGCAATTGCAGGTTTCTTCTTGAGTTGAATGTTTCTGGTAATAACTTAGAGGGAGAGATTCCTCAGACCCTTTACAACATGACAAACTTGAAGATTCTTGACCTGCATGAGAACAGGCTCAATGGAAACATCCCACCAAGCCTAGGAAACTCATCAAGCATTAGATACCTGGATTTGTCACATAATTTGCTTTCTGGTTCAATCCCTTCTTCCCTTGGAAATTTAAAATACCTAACATATTTTAATTTGTCATTCAACAATCTCTCTGGTGTTATTCCTCCTATTGCAAACATACAAGGTTTTGGTTCCTCAGCATTTTCGAACAATCCTTTTCTCTGTGGTTCTCCTTTAGATGATAATACCTCATGCTCAGAAAATGGCACAAACTATTCACCTTCAGCTTCTGGGAAGACCAAAGTGCTTAGTGTTTCAGCAATTGTTGCCATTGTTGCTGCAGCCTTCATTCTTGCTGGGGTTTTTGTGGTGGCCATCTTGAACACTAAGACTCGGAACAGAAACAAAGAGGATCATCAGACAATGATTGTTGAGAGCACACCTCTTGGATCAACAGAATCAAGTGTTGTAATTGGGAAGCTGGTTCTCTTCAGCAAAAGCTTACCATCAAAGTATGAAGATTGGGAAGCAGGAACAAAAGCATTGCTTGACAAAGAGTCTCTGATAGGCGCTGGATCAATCGGTACAGTGTACAGAACAAATCTTGAAGGTGGGGTTTCAGTTGCAGTCAAAAAGCTTGAAACTTTGGGAACAATCAGAAGCCAGCACGAGTTTGAACACGAAATAGTTCGACTAGGCAATCTCAAACACCCAAATTTAGTTTCTTTCCAAGGTTACTATTGGTCCCCAACAATGCAAATGATCCTATCAGAGTTCATCCCAAATGGAAATCTCCATGATAATCTACATGGAAACAGTGAACAACTAAATTGGTCCAGAAGGTTACAGATTGCACTGGGAACAGCAAGAGCTCTTGCCTATCTTCACCATGACTGTGAACTTCCAATTCTACATCTCAACCTTAAATCCTCCAACATACTCTTAGATAACAAGTATGAAGCAAAGCTATCAGATTATGGCCTAAACAAGTTACTTCCTATTAACAATTATTATGGTGGCACCAAATTCCACAATTCAGTGGGGTACATTGCACCAGAGTTGGCTACGAGTTTAAGGCAGAGCGAGAAATGTGATGTTTATAGCTTTGGGGTGATTCTGTTGGAACTGGTCACGGGGAAGAAGCCTGTAGAAAGTAATGTAGCAGCAGCAGAAAATGGAGGAATGGTAGTGGTCTTGTGTGAGTATGTCAGAGTGTTGTTGGACAGTGGTTCTGCTTCAGATTGCTTGGATAGAAGGTTGGTAGGAGGCTTGCCTGAGAGTGAGTTTATCCAGGTGATGAGGATGGGACTGATCTGTACTTCAGCAGATCCTTCTAGAAGACCAACTATGGCTGAGATTGTGCAGTTCCTTGAGTCTGTTGAAATTGCATCAGAATCACGTTGA 2676 0.3957 MKGVSQIPLFVHHVLLFAALLPLSSLKVSSSPESEKEILLELKGNITDDPHNSLSSWVSSGNPCEDYMGISCNSQGFVEKIVLWNTSLAGVLSPALSRLKLLKVLTLYGNHFSGKIPEEYAEFQSVWKINLSSNALSGPIPEFIGNIKSLRFLDLSLNGFSGDIPSALFKYCYKTKFLSFSHNNLSGSIPASIVNCLNLEGFDFSFNNLTGNIPSRLCDIPMLSYASLRNNALSGTEQDQIFSECHSLVYINLASNMFSGSAPFNILEMKNLTYFNISYNRFSGHIPEMSSCSEILEVLDASGNDLEGEIPMSITRCKKLKLLALEVNRLIGTIPLRIQELKSLLIVKLGDNSIGGTIPKDFGNIELLEILDLQNLNLIGKIPNDVCNCRFLLELNVSGNNLEGEIPQTLYNMTNLKILDLHENRLNGNIPPSLGNSSSIRYLDLSHNLLSGSIPSSLGNLKYLTYFNLSFNNLSGVIPPIANIQGFGSSAFSNNPFLCGSPLDDNTSCSENGTNYSPSASGKTKVLSVSAIVAIVAAAFILAGVFVVAILNTKTRNRNKEDHQTMIVESTPLGSTESSVVIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGAGSIGTVYRTNLEGGVSVAVKKLETLGTIRSQHEFEHEIVRLGNLKHPNLVSFQGYYWSPTMQMILSEFIPNGNLHDNLHGNSEQLNWSRRLQIALGTARALAYLHHDCELPILHLNLKSSNILLDNKYEAKLSDYGLNKLLPINNYYGGTKFHNSVGYIAPELATSLRQSEKCDVYSFGVILLELVTGKKPVESNVAAAENGGMVVVLCEYVRVLLDSGSASDCLDRRLVGGLPESEFIQVMRMGLICTSADPSRRPTMAEIVQFLESVEIASESR 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00535 891 CDD STKc_IRAK 613 882 - -
Accr10g00535 891 SUPERFAMILY Protein kinase-like (PK-like) 608 882 IPR011009 -
Accr10g00535 891 Gene3D Phosphorylase Kinase; domain 1 607 687 - -
Accr10g00535 891 FunFam Putative LRR receptor-like serine/threonine-protein kinase 584 683 - -
Accr10g00535 891 FunFam Putative LRR receptor-like serine/threonine-protein kinase 685 888 - -
Accr10g00535 891 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 32 170 - -
Accr10g00535 891 SUPERFAMILY L domain-like 78 214 - -
Accr10g00535 891 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Accr10g00535 891 Gene3D Ribonuclease Inhibitor 31 173 IPR032675 -
Accr10g00535 891 SUPERFAMILY L domain-like 170 503 - -
Accr10g00535 891 Pfam Protein tyrosine and serine/threonine kinase 610 881 IPR001245 GO:0004672|GO:0006468
Accr10g00535 891 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 171 512 - -
Accr10g00535 891 Gene3D Ribonuclease Inhibitor 174 240 IPR032675 -
Accr10g00535 891 PANTHER OS05G0588300 PROTEIN 217 311 - -
Accr10g00535 891 Pfam Leucine rich repeat 394 450 IPR001611 GO:0005515
Accr10g00535 891 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00535 891 Gene3D Ribonuclease Inhibitor 241 511 IPR032675 -
Accr10g00535 891 Gene3D Transferase(Phosphotransferase) domain 1 688 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00535 Accr-Chr10 9588106 9591017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00535 14 890 Receptor kinase-like Gene Family AT1G62950 60.089 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Accr10g00535 PK_Tyr_Ser-Thr 8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00535 - - gmx:100805681 1206.82