Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00526 ATGGAGGCCAGGGATGTCGTTAATAGTGGGGTCACAGTGGTGCGATCAGATACTCCGTCGAACTACCATGTAGCTCTGAGCACTGAAGACCCGTCTTCCAACGGGGGATCAACGGCACCGACGCCTCAAGGGAGTGTTCCGCCACCTCAACCAGTTGCTATGGGTATGGCTTCGGCGGTGACAACGATGCCGGTGAAGAAAAAGAGGGGTCGGCCGAGGAAGTACGGACCAGACGGGTCAGTTGCTATGGGTATGGCTCCGGCGGCGACAATGATGCCGGTGAAGAAAAAGAGTGGTCGGCCGATGAAGTACGGACCAGACGGGTCAGTGATTACGATGGCTGTATCTCCGTCGTCGTCTCCGCCGGCAGTAATCGATTTCGCGGCGGGGAAACGCGGTAAAGTGCGCTCTGCTAGCTCAGTACACACAACCAAATTTGAAGTTGAAAATTTAGGTGAATGGGCTGCAGTCTCCATTGGTACTAATTTTACACCTCATATCATTACCATTAATTCTGGGGAGGACATCACTATGAAGATAATATCATTTTCCCAGCAGGGGCCTCGAGCGATATGCATTCTTTCTGCTGCTGGAGTCATATCAAGTGTTATGCTTCAGCAGGCTGATTCTTTTGGGGGTACACTGACATATGAGGGACGGTTTGAAATTTTGTCATTATCTGGCTCATTCATGCCAAATGAGAGTGCAGGAACACGAAGCAGATCGGGTGGCATGAGCATTTCTTTAGTGAGTCCAGAGGGACGTGTCATAGGAGGCAGTATAGCTGGTTTGTTGGTAGCAGCAAGTCCTGTGCAGGTTGTGGTTGGCAGTTTTCTGGCGGGAAACCAGCATGATGTGAAGACAAAGAAACAGAAACATGAGATTGTATCAACAGCAATTGTTCCTTTGTGTGCTGGTGATCCAATACCTATCCTCTCATCTCCACCTTCCTTCCGTTCTGATAATTGGTCTGCATTGCCTTCTGATACGAGGAACAACGTGACCACTGACATTAATATGCCTCTTTCTGCTGAATATATATTTTCTGCTGACAAAAATAAAACCAATTATATATAG 1077 0.4838 MEARDVVNSGVTVVRSDTPSNYHVALSTEDPSSNGGSTAPTPQGSVPPPQPVAMGMASAVTTMPVKKKRGRPRKYGPDGSVAMGMAPAATMMPVKKKSGRPMKYGPDGSVITMAVSPSSSPPAVIDFAAGKRGKVRSASSVHTTKFEVENLGEWAAVSIGTNFTPHIITINSGEDITMKIISFSQQGPRAICILSAAGVISSVMLQQADSFGGTLTYEGRFEILSLSGSFMPNESAGTRSRSGGMSISLVSPEGRVIGGSIAGLLVAASPVQVVVGSFLAGNQHDVKTKKQKHEIVSTAIVPLCAGDPIPILSSPPSFRSDNWSALPSDTRNNVTTDINMPLSAEYIFSADKNKTNYI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00526 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 91 294 IPR039605 GO:0003680
Accr10g00526 358 MobiDBLite consensus disorder prediction 11 41 - -
Accr10g00526 358 MobiDBLite consensus disorder prediction 1 54 - -
Accr10g00526 358 FunFam AT-hook motif nuclear-localized protein 1-like 165 296 - -
Accr10g00526 358 Pfam Plants and Prokaryotes Conserved (PCC) domain 165 278 IPR005175 -
Accr10g00526 358 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 280 - -
Accr10g00526 358 Gene3D - 165 298 - -
Accr10g00526 358 ProSiteProfiles PPC domain profile profile. 160 302 IPR005175 -
Accr10g00526 358 CDD DUF296 164 278 IPR005175 -
Accr10g00526 358 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00526 Accr-Chr10 9355609 9359635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00526 8 340 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.222 1.56e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00526 - - qsa:O6P43_024280 399.823