Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00515 ATGGATTCTGTTCGTTTCCTCCTGGTTTCCGTGCTTCTTCTCTTGCTTGCATTTCATGGCCTGCAACCTGTTCGGGGAAACGCCGAGCTGAGAGCTTTGATGGAATTAAAGTCGTCTCTGGATCCAGAGGACAAGGTTCTTGGTTCGTGGACCAATGATGGTGAGCCATGTTTGTTTGAAGGGATAGCATGCAACGAGCATAGAAAAGTGGCCAACATTTCGTTGCAGGGAAAGGGGCTCTCTGGATGGCTCTCTCCAGTTGTGGCTGAACTCAAATGTTTGTCTGGTTTATACCTTCACTACAACAATCTCTCTGGCGAGATCCCCAGTGAGATTTCAAATCTCACTGATTTGGTTGATCTCTATCTTGACTTTAATAATCTAACTGGAAATATACCTCCTGAGCTCAGCCACATGCCTAATCTCCAAGTGCTGCAGTTAGGGTATAACCAGCTCGTGGGCACTATACCAAAAGAGATGGGCTCCTTGAAGCAGCTTACTGCCTTGGAATTACAATGTAACAAATTAAGTGGTACAATTCCTCTCAGCTTGGGGAATTTGGAGAAGCTAAGGATGCTAAACCTGAGCTTTAACAGCTTCAATGGTTCAATCCCTGCAACACTTGCTGATCTTGAAATGTTGCGAGCTCTTGATATTCGAAACAATTCTCTATCTGGAAGGGTTCCTTCTGCTTTGAAGACTTTGAGGGATGGATTCCAAGGTGCAAATAACCTGGATTTATGTGGACATGGGTTTTCCACTTTGAAAGCTTGCAGCAATGATTCAACTTTAAACTCTAACCAGATTGACACCTCAAATCCAACCAAAGAAGGTCTTCCTGCAAAGAATTTTCCTGAACCCGCAAATGTTCGGTTGAATTGTAACCAGACCCATTGCTCAAAATCAAGAATGTTTCCTCAAGCACTCATTGCGTCAAGTGTTATAACTACCATAATCACATTCATATGCGTTGGACTTTTTACTTTTATCAAATACCGACGCCAAAGGCAAAGAATTACAAATTCATCAGAATCTTCTGAAGGGAAACTTAGTCCTTATCAGCCTAAAGAACTGTACAAAAGAAGTCCATCGCCGCTTGTTAATCTTAACTACTATAATGGATGGGATCCAAATTCAACGGCTGATGCTCAAAATGGAAACAGATTATCCCATGAGTATCTAAACCGTTTTAGGTTTACTGTGGATGAGATTGAATCTGCCACACAGTACTTCTCTGAGGCTAACTTATTAAGTAAGAGCAAATTATCAGCAGTCTACAAAGGAATCCTCAGGGATGGCTCACTTGTGGCTATAAGAAGCATTAATGTGACATGTTGTAAGACTGAGGAAGCTGAATTTGTAAATGGGTTGAACTTGGTGCTTTCATTGAGACATGAAAACCTAGTTAGGCTCAGAGGTTTCTGTTGCTCTGCAAGTAGAGGTGAATGTTTCCTTGTCTATGACTTTGCTCCTAAGGGTGATTTGTCTCAATACCTTGACTTGGAAGATGGAAGTGGTCAAGTTCTAGAGTGGACCAAGAGGGTTTCTATCATTAAGGGAATTGCAAAAGGTATTGGGTATCTACACAGCAATGAAACAAACAAGCCTACAATGGTACACCAAAATTTGTCCGTTGAAAAAGTTGTGCTTGACCATCAATTCAGCCCCTTGATTATGGATTCTGGCCTCCCAAAGCTTCTCGCAGATGACGCGGTTTTCTCAGCTCTGAAAGTAAGTGCAGCCATGGGATACTTGGCTCCTGAATACATCACTACTGGGAGATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATAATCCTTCAAGTAGTTTCTGGGAAAACTGTTATAGGTAGTTCAATCAAGATGGCAGTTGAGTCTTTCAGATTTGAAGACTTTGTTGATTCAAATCTGAAGGGACGATATGCGAAATCTGAAGCAGCAATGATGGCGAAGCTCGCTCTGATGTGTACTCATGAGCTTCCTGATCAGAGGCCAACTATGGTGGAAGTGATTCAGGAGATGCATGCTTTTCCAGCTCAACATGCTTCTTAA 2058 0.4208 MDSVRFLLVSVLLLLLAFHGLQPVRGNAELRALMELKSSLDPEDKVLGSWTNDGEPCLFEGIACNEHRKVANISLQGKGLSGWLSPVVAELKCLSGLYLHYNNLSGEIPSEISNLTDLVDLYLDFNNLTGNIPPELSHMPNLQVLQLGYNQLVGTIPKEMGSLKQLTALELQCNKLSGTIPLSLGNLEKLRMLNLSFNSFNGSIPATLADLEMLRALDIRNNSLSGRVPSALKTLRDGFQGANNLDLCGHGFSTLKACSNDSTLNSNQIDTSNPTKEGLPAKNFPEPANVRLNCNQTHCSKSRMFPQALIASSVITTIITFICVGLFTFIKYRRQRQRITNSSESSEGKLSPYQPKELYKRSPSPLVNLNYYNGWDPNSTADAQNGNRLSHEYLNRFRFTVDEIESATQYFSEANLLSKSKLSAVYKGILRDGSLVAIRSINVTCCKTEEAEFVNGLNLVLSLRHENLVRLRGFCCSASRGECFLVYDFAPKGDLSQYLDLEDGSGQVLEWTKRVSIIKGIAKGIGYLHSNETNKPTMVHQNLSVEKVVLDHQFSPLIMDSGLPKLLADDAVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFRFEDFVDSNLKGRYAKSEAAMMAKLALMCTHELPDQRPTMVEVIQEMHAFPAQHAS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00515 685 FunFam Protein NSP-INTERACTING KINASE 2 382 489 - -
Accr10g00515 685 SUPERFAMILY Protein kinase-like (PK-like) 387 676 IPR011009 -
Accr10g00515 685 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Accr10g00515 685 Gene3D Phosphorylase Kinase; domain 1 377 489 - -
Accr10g00515 685 ProSiteProfiles Protein kinase domain profile. 411 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00515 685 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 71 676 - -
Accr10g00515 685 FunFam Protein NSP-INTERACTING KINASE 2 490 680 - -
Accr10g00515 685 SUPERFAMILY L domain-like 37 252 - -
Accr10g00515 685 FunFam Protein NSP-INTERACTING KINASE 2 26 173 - -
Accr10g00515 685 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Accr10g00515 685 Pfam Protein tyrosine and serine/threonine kinase 417 675 IPR001245 GO:0004672|GO:0006468
Accr10g00515 685 Gene3D Transferase(Phosphotransferase) domain 1 490 682 - -
Accr10g00515 685 Gene3D Ribonuclease Inhibitor 142 250 IPR032675 -
Accr10g00515 685 Gene3D Ribonuclease Inhibitor 28 138 IPR032675 -
Accr10g00515 685 MobiDBLite consensus disorder prediction 338 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00515 Accr-Chr10 9047341 9051423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00515 8 524 Miscellaneous Gene Families AT4G22730 56.716 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Accr10g00515 PK_Tyr_Ser-Thr 6.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00515 - - pcin:129311672 1154.81